Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM678422 Small RNA from mouse epididymis 7,361,966 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 skin mouse epididymis
2 GSM566377 B6129-Fibroblast1 input, methyl-depleted 2,157,430 Johns Hopkins University School of Medicine 2010-07-14 [Oligo Array] NimbleGen Mouse 2.1M array [100512_MM8_CHARM_HX1] (GPL10683) genomic Mus musculus
Mus musculus		 skin Input fraction from B6129-Fibroblast1 Methyl-depleted fraction from B6129-Fibroblast1
3 GSM566378 B6129-Fibroblast2 input, methyl-depleted 2,157,430 Johns Hopkins University School of Medicine 2010-07-14 [Oligo Array] NimbleGen Mouse 2.1M array [100512_MM8_CHARM_HX1] (GPL10683) genomic Mus musculus
Mus musculus		 skin Input fraction from B6129-Fibroblast2 Methyl-depleted fraction from B6129-Fibroblast2
4 GSM566384 B6CBA-Fibroblast1 input, methyl-depleted 2,157,430 Johns Hopkins University School of Medicine 2010-07-14 [Oligo Array] NimbleGen Mouse 2.1M array [100512_MM8_CHARM_HX1] (GPL10683) genomic Mus musculus
Mus musculus		 skin Input fraction from B6CBA-Fibroblast1 Methyl-depleted fraction from B6CBA-Fibroblast1
5 GSM566385 B6CBA-Fibroblast2 input, methyl-depleted 2,157,430 Johns Hopkins University School of Medicine 2010-07-14 [Oligo Array] NimbleGen Mouse 2.1M array [100512_MM8_CHARM_HX1] (GPL10683) genomic Mus musculus
Mus musculus		 skin Input fraction from B6CBA-Fibroblast2 Methyl-depleted fraction from B6CBA-Fibroblast2
6 GSM346609 Mouse Embryonic Fibroblasts (MEF) lincRNA Expression_rep1 2,130,447 Broad Institute 2008-11-29 [Tiling Array] Mouse lincRNA Tiling Array (HD2 Platform) (GPL7706) RNA Mus musculus
Mus musculus		 skin Mouse Embryonic Fibroblasts (MEF) lincRNA Expression_rep1
7 GSM400424 adipose brown 29 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 adipos adipose_brown
8 GSM400425 adipose brown 30 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 adipos adipose_brown
9 GSM400426 olfactory bulb 31 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin olfactory_bulb
10 GSM400427 olfactory bulb 32 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin olfactory_bulb
11 GSM400484 epidermis 89 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin epidermis
12 GSM400485 epidermis 90 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin epidermis
13 GSM400488 adipose white 93 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 adipos adipose_white
14 GSM400489 adipose white 94 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 adipos adipose_white
15 GSM400492 bone 97 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 bone bone
16 GSM400493 bone 98 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 bone bone
17 GSM855455 TAF7 Depletion in Mouse Embryonic Fibroblasts, sample 1 1,201,338 National Cancer Institute 2011-12-30 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin embryonic fibroblasts, Taf7(+/+)-1, uninfected, 24 hrs
18 GSM855456 TAF7 Depletion in Mouse Embryonic Fibroblasts, sample 2 1,201,338 National Cancer Institute 2011-12-30 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin embryonic fibroblasts, Taf7(+/+)-1, uninfected, 24 hrs
19 GSM855457 TAF7 Depletion in Mouse Embryonic Fibroblasts, sample 3 1,201,338 National Cancer Institute 2011-12-30 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin embryonic fibroblasts, Taf7(+/+)-1, uninfected, 24 hrs
20 GSM855458 TAF7 Depletion in Mouse Embryonic Fibroblasts, sample 4 1,201,338 National Cancer Institute 2011-12-30 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 skin embryonic fibroblasts, Taf7f/f-2, uninfected, 24 hrs
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