Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(26,601)		   Primates
(89)		   Rodents
(7,784)		   Mammals
(611)		   Vertebrates
(768)		   Invertebrates
(2,181)		   Plants
(2,707)		   Bacteria
(1,248)		   Viruses
(236)		   Phages
(0)		   Unclassified
(653)		   All
(42,962)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(3,762)		   Tiling Array
(212)		   cDNA Array
(35)		   Oligo Array
(1,959)		   Bead Array
(1,354)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(78)		   HT-Seq
(375)		   Other
(9)		   All
(7,784)		  
  brain
(1,325)		   blood
(1,107)		   connective
(513)		   reproductive
(273)		   muscular
(315)		   digestive
(231)		   liver
(438)		   lung
(168)		   urinary
(293)		   endo/exo-crine
(376)		   embryo
(515)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(355)		   unclassified
(1,875)		   all
(7,784)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM657989 aCGH tumor T276 385,079 The Netherlands Cancer Institute 2011-01-19 [Oligo Array] NimbleGen Mouse 385kb array [2006-07-26_MM8_WG_CGH] (GPL11620) genomic Mus musculus
Mus musculus		 liver/hepato DNA from Palb2GT/+;p53-/- lymphoma DNA from Palb2GT/+;p53-/- liver
2 GSM657991 aCGH tumor T254 385,079 The Netherlands Cancer Institute 2011-01-19 [Oligo Array] NimbleGen Mouse 385kb array [2006-07-26_MM8_WG_CGH] (GPL11620) genomic Mus musculus
Mus musculus		 liver/hepato DNA from Palb2GT/+;p53-/- lymphoma DNA from Palb2GT/+;p53-/- liver
3 GSM657992 aCGH tumor T174 385,079 The Netherlands Cancer Institute 2011-01-19 [Oligo Array] NimbleGen Mouse 385kb array [2006-07-26_MM8_WG_CGH] (GPL11620) genomic Mus musculus
Mus musculus		 liver/hepato DNA from Palb2+/+;p53-/- lymphoma DNA from Palb2+/+;p53-/- liver
4 GSM657993 aCGH tumor T176 385,079 The Netherlands Cancer Institute 2011-01-19 [Oligo Array] NimbleGen Mouse 385kb array [2006-07-26_MM8_WG_CGH] (GPL11620) genomic Mus musculus
Mus musculus		 liver/hepato DNA from Palb2GT/+;p53-/- lymphoma DNA from Palb2GT/+;p53-/- liver
5 GSM657996 aCGH tumor T068 385,079 The Netherlands Cancer Institute 2011-01-19 [Oligo Array] NimbleGen Mouse 385kb array [2006-07-26_MM8_WG_CGH] (GPL11620) genomic Mus musculus
Mus musculus		 liver/hepato DNA from Palb2GT/+;p53-/- lymphoma DNA from Palb2GT/+;p53-/- liver
6 GSM657998 aCGH tumor T095 385,079 The Netherlands Cancer Institute 2011-01-19 [Oligo Array] NimbleGen Mouse 385kb array [2006-07-26_MM8_WG_CGH] (GPL11620) genomic Mus musculus
Mus musculus		 liver/hepato DNA from Palb2GT/+;p53-/- lymphoma DNA from Palb2GT/+;p53-/- liver
7 GSM649508 miR-143DOX hepatocytes, biological rep1 234,873 Institute for Genetics, University of Cologne 2011-01-05 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] (GPL10740) RNA Mus musculus
Mus musculus		 liver/hepato hepatocytes isolated from doxycycline-treated miR-143 transgenic mice
8 GSM649509 control hepatocytes, biological rep1 234,873 Institute for Genetics, University of Cologne 2011-01-05 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] (GPL10740) RNA Mus musculus
Mus musculus		 liver/hepato hepatocytes isolated from doxycycline-treated control mice
9 GSM649510 control hepatocytes, biological rep2 234,873 Institute for Genetics, University of Cologne 2011-01-05 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] (GPL10740) RNA Mus musculus
Mus musculus		 liver/hepato hepatocytes isolated from doxycycline-treated control mice
10 GSM649511 miR-143DOX hepatocytes, biological rep2 234,873 Institute for Genetics, University of Cologne 2011-01-05 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] (GPL10740) RNA Mus musculus
Mus musculus		 liver/hepato hepatocytes isolated from doxycycline-treated miR-143 transgenic mice
11 GSM649512 control hepatocytes, biological rep3 234,873 Institute for Genetics, University of Cologne 2011-01-05 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] (GPL10740) RNA Mus musculus
Mus musculus		 liver/hepato hepatocytes isolated from doxycycline-treated control mice
12 GSM649513 miR-143DOX hepatocytes, biological rep3 234,873 Institute for Genetics, University of Cologne 2011-01-05 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] (GPL10740) RNA Mus musculus
Mus musculus		 liver/hepato hepatocytes isolated from doxycycline-treated miR-143 transgenic mice
13 GSM696980 colorectal tumor_32914_azoxymethane treatment 180,880 University of Ulm 2011-03-23 [Oligo Array] Agilent-027411 SurePrint G3 Mouse CGH Microarray 4x180K (Feature Number version) (GPL10449) genomic Mus musculus
Mus musculus		 liver/hepato 32914 (FvB background, colorectal tumor) control chromosomal DNA from liver
14 GSM696981 colorectal tumor_32916_azoxymethane treatment 180,880 University of Ulm 2011-03-23 [Oligo Array] Agilent-027411 SurePrint G3 Mouse CGH Microarray 4x180K (Feature Number version) (GPL10449) genomic Mus musculus
Mus musculus		 liver/hepato 32916 (FvB background, colorectal tumor) control chromosomal DNA from liver
15 GSM696982 colorectal tumor_33021_azoxymethane treatment 180,880 University of Ulm 2011-03-23 [Oligo Array] Agilent-027411 SurePrint G3 Mouse CGH Microarray 4x180K (Feature Number version) (GPL10449) genomic Mus musculus
Mus musculus		 liver/hepato 33021 (FvB background, colorectal tumor) control chromosomal DNA from liver
16 GSM696983 colorectal tumor_33024_azoxymethane treatment 180,880 University of Ulm 2011-03-23 [Oligo Array] Agilent-027411 SurePrint G3 Mouse CGH Microarray 4x180K (Feature Number version) (GPL10449) genomic Mus musculus
Mus musculus		 liver/hepato 33024 (FvB background, colorectal tumor) control chromosomal DNA from liver
17 GSM650993 Liver-S0-T6-R1 45,281 JUH 2011-01-06 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 liver/hepato Liver samples from mice challenged to sham treatment
18 GSM650994 Liver-S0-T6-R2 45,281 JUH 2011-01-06 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 liver/hepato Liver samples from mice challenged to sham treatment
19 GSM650995 Liver-S0-T6-R3 45,281 JUH 2011-01-06 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 liver/hepato Liver samples from mice challenged to sham treatment
20 GSM650996 Liver-S2-T6-R1 45,281 JUH 2011-01-06 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 liver/hepato Liver samples from mice challenged to S2 treatment monitored after 6 hours
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