Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(94,264)		   Tiling Array
(2,050)		   cDNA Array
(11,257)		   Oligo Array
(54,809)		   Bead Array
(14,658)		   Protein Array
(0)		   Antibody
(26)		   RT-PCR
(985)		   HT-Seq
(9,960)		   Other
(425)		   All
(189,292)		  
  brain
(28,502)		   blood
(21,772)		   connective
(11,810)		   reproductive
(6,910)		   muscular
(12,426)		   digestive
(4,791)		   liver
(31,230)		   lung
(8,838)		   urinary
(5,192)		   endo/exo-crine
(5,772)		   embryo
(7,981)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,430)		   unclassified
(34,638)		   all
(189,292)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM470248 Hamster Liver_1 24,353 UCLA 2009-11-12 [Bead Array] Sentrix HumanRef-8 Expression BeadChip (GPL2700) RNA Cricetulus griseus
Cricetulus griseus		 liver/hepato Hamster Liver
2 GSM470249 Hamster Liver_2 24,353 UCLA 2009-11-12 [Bead Array] Sentrix HumanRef-8 Expression BeadChip (GPL2700) RNA Cricetulus griseus
Cricetulus griseus		 liver/hepato Hamster Liver
3 GSM470250 Hamster Liver_3 24,353 UCLA 2009-11-12 [Bead Array] Sentrix HumanRef-8 Expression BeadChip (GPL2700) RNA Cricetulus griseus
Cricetulus griseus		 liver/hepato Hamster Liver
4 GSM470251 Hamster Liver_4 24,353 UCLA 2009-11-12 [Bead Array] Sentrix HumanRef-8 Expression BeadChip (GPL2700) RNA Cricetulus griseus
Cricetulus griseus		 liver/hepato Hamster Liver
5 GSM229426 Hamster Liver vs Mouse Liver 20,868 UCLA 2007-09-13 [Oligo Array] Agilent-011978 Mouse Microarray G4121A (Feature Number version) (GPL891) RNA Cricetulus griseus,Mus musculus
Cricetulus griseus,Mus musculus		 liver/hepato Total RNA from Chinese hamster whole liver Total RNA from mouse whole liver
6 GSM752147 pup_liver 0 BGI-Shenzhen, Shenzhen 518083, China 2011-06-30 [HT Sequencing] Illumina HiSeq 2000 (Heterocephalus glaber) (GPL13793) SRA Heterocephalus glaber
Heterocephalus glaber		 liver/hepato liver in pupil naked mole rat
7 GSM752148 liver4 0 BGI-Shenzhen, Shenzhen 518083, China 2011-06-30 [HT Sequencing] Illumina HiSeq 2000 (Heterocephalus glaber) (GPL13793) SRA Heterocephalus glaber
Heterocephalus glaber		 liver/hepato liver in 4-year naked mole rat
8 GSM752149 liver20 0 BGI-Shenzhen, Shenzhen 518083, China 2011-06-30 [HT Sequencing] Illumina HiSeq 2000 (Heterocephalus glaber) (GPL13793) SRA Heterocephalus glaber
Heterocephalus glaber		 liver/hepato liver in 20-year naked mole rat
9 GSM752157 low_liver 0 BGI-Shenzhen, Shenzhen 518083, China 2011-06-30 [HT Sequencing] Illumina HiSeq 2000 (Heterocephalus glaber) (GPL13793) SRA Heterocephalus glaber
Heterocephalus glaber		 liver/hepato liver in 4 years old hypoxia-exposed naked mole rat
10 GSM763475 mRNA_nmr 0 University of Oxford 2011-07-18 [HT Sequencing] Illumina Genome Analyzer (Heterocephalus glaber) (GPL13940) SRA Heterocephalus glaber
Heterocephalus glaber		 liver/hepato Liver
11 GSM279138 woodchuck 6361 normal tissue surrounding the liver HCC 54,675 case Western Reserve University 2008-04-03 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver tissue with no HCC, but surrouding the HCCs, human array
12 GSM279140 woodchuck 6361 liver HCC 54,675 case Western Reserve University 2008-04-03 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver HCC as indicated by ultrasound, human array
13 GSM279141 woodchuck 5904 HCC tissue 54,675 case Western Reserve University 2008-04-03 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver HCC as confirmed with ultrasound, human array
14 GSM279142 woodchuck 5904 normal tissue surrounding the liver HCC 54,675 case Western Reserve University 2008-04-03 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver tissue with no HCC, but surrouding the HCCs, human array
15 GSM279143 woodchuck 6337 normal tissue surrounding the liver HCC 54,675 case Western Reserve University 2008-04-03 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver tissue with no HCC, but surrouding the HCCs, human array
16 GSM279145 woodchuck 6337 HCC 54,675 case Western Reserve University 2008-04-03 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver HCC tumor confirmed with ultrasound, human array
17 GSM279153 woodchuck 6361 normal tissue surrounding the liver HCC, mouse array 45,101 case Western Reserve University 2008-04-03 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver tissue with no HCC, but surrouding the HCCs, mouse array
18 GSM279155 woodchuck 6361 HCC, mouse array 45,101 case Western Reserve University 2008-04-03 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver HCC tumor confirmed with ultrasound, mouse array
19 GSM279156 woodchuck 5904 HCC, mouse array 45,101 case Western Reserve University 2008-04-03 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver HCC tumor confirmed with ultrasound, mouse array
20 GSM279157 woodchuck 5904 normal tissue surrounding the liver HCC, mouse array 45,101 case Western Reserve University 2008-04-03 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Marmota monax
Marmota monax		 liver/hepato woodchuck liver tissue with no HCC, but surrouding the HCCs, mouse array
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