Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM539875 mouse muscle tissue [09-002] 27,194 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 muscle Mouse Skeletal Muscle
2 GSM539868 mouse heart tissue [09-002] 6,324 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 heart Mouse Heart
3 GSM813777 Mouse_TotalHeart_miRNA_MALE 362 Whitehead Institute 2011-10-11 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 heart Mouse Heart
4 GSM813778 Mouse_TotalHeart_miRNA_FEMALE 362 Whitehead Institute 2011-10-11 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 heart Mouse Heart
5 GSM1000093 LICR_ChipSeq_Heart_H3K27ac_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
6 GSM1000129 LICR_ChipSeq_Heart_H3K79me2_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
7 GSM1000130 LICR_ChipSeq_Heart_H3K36me3_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
8 GSM1000131 LICR_ChipSeq_Heart_H3K27me3_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
9 GSM1000135 LICR_ChipSeq_Heart_H3K4me3_E14.5 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
10 GSM1000136 LICR_ChipSeq_Heart_H3K4me1_E14.5 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
11 GSM1000137 LICR_ChipSeq_Heart_H3K27ac_E14.5 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
12 GSM1000149 LICR_ChipSeq_Heart_H3K9ac_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
13 GSM1000208 LICR_ChipSeq_Heart_Input_E14.5 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
14 GSM1003820 UW_DnaseDgf_Heart_adult-8wks 0 UCSC ENCODE DCC 2012-09-13 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Heart
15 GSM1014166 UW_DnaseSeq_Heart_adult-8wks_C57BL/6 0 UCSC ENCODE DCC 2012-10-03 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 heart Heart
16 GSM1014189 UW_DnaseSeq_SkMuscle_adult-8wks_C57BL/6 0 UCSC ENCODE DCC 2012-10-03 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 muscle SkMuscle
17 GSM1015154 Mouse heart 0 University of Toronto 2012-10-04 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Mouse_heart_pooled
18 GSM1015155 Mouse skeletal muscle 0 University of Toronto 2012-10-04 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 muscle Mouse_skeletal muscle_pooled
19 GSM1018808 mock 0 International Centre for Genetic Engineering and Biotechnology - ICGEB 2012-10-12 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Neonatal cardiomyocytes
20 GSM1018809 cel-miR-67 0 International Centre for Genetic Engineering and Biotechnology - ICGEB 2012-10-12 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 heart Neonatal cardiomyocytes
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