Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(8,338)
  muscular
(14,417)
  digestive
(5,405)
  liver
(0)
  lung
(10,598)
  urinary
(5,877)
  endo/exo-crine
(0)
  embryo
(10,361)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(0)
  all
(225,055)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1006370 Rag1-/- proB 0 TSRI 2012-09-19 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled Rag1-/- proB; Bone marrow cells isolated from Rag1-/- mice were enriched for CD19+ pro-B cells with MACS microbeads.
2 GSM1006371 Rag1-/- proB_IGH_Enriched 0 TSRI 2012-09-19 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
pooled Rag1-/- proB_IGH_Enriched; Bone marrow cells isolated from Rag1-/- mice were enriched for CD19+ pro-B cells with MACS microbeads. RNA was enriched on an array contain DNA from the Ig loci.
3 GSM1013575 CD4+ T cells, 155KO, biological rep1 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
4 GSM1013576 CD4+ T cells, 155KO, biological rep2 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
5 GSM1013577 CD4+ T cells, 155KO, biological rep3 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
6 GSM1013578 CD4+ T cells, 155KO, biological rep4 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
7 GSM1013579 CD4+ T cells, 155KO, biological rep5 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
8 GSM1013580 CD4+ T cells, 155KO, biological rep6 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
9 GSM1013581 CD4+ T cells, 155KO, biological rep7 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
10 GSM1013582 CD4+ T cells, 155KO, biological rep8 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
11 GSM1013583 CD4+ T cells, 155KO, biological rep9 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
12 GSM1013584 CD4+ T cells, 155KO, biological rep10 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
13 GSM1013585 CD4+ T cells, 155KO, biological rep11 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
14 GSM1013586 CD4+ T cells, 155KO, biological rep12 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
15 GSM1013587 CD4+ T cells, WT, biological rep1 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
16 GSM1013588 CD4+ T cells, WT, biological rep2 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
17 GSM1013589 CD4+ T cells, WT, biological rep3 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
18 GSM1013590 CD4+ T cells, WT, biological rep4 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
19 GSM1013591 CD4+ T cells, WT, biological rep5 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes
20 GSM1013592 CD4+ T cells, WT, biological rep6 0 The University of Chicago 2012-10-02 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
pooled In vitro activated CD4+ T cells from spleen and lymph nodes