Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(94,264)		   Tiling Array
(2,050)		   cDNA Array
(11,257)		   Oligo Array
(54,809)		   Bead Array
(14,658)		   Protein Array
(0)		   Antibody
(26)		   RT-PCR
(985)		   HT-Seq
(9,960)		   Other
(425)		   All
(189,292)		  
  brain
(28,502)		   blood
(21,772)		   connective
(11,810)		   reproductive
(6,910)		   muscular
(12,426)		   digestive
(4,791)		   liver
(31,230)		   lung
(8,838)		   urinary
(5,192)		   endo/exo-crine
(5,772)		   embryo
(7,981)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,430)		   unclassified
(34,638)		   all
(189,292)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM254821 Pinealectomised (PX):Control (CON) 1 15,247 University of Cambridge 2008-01-07 [cDNA Array] MRC MGU Harwell NIA 15K Spotted cDNA Microarray (GPL6025) RNA Mesocricetus auratus
Mesocricetus auratus		 pooled pinealectomised testes control testes
2 GSM254822 Pinealectomised (PX):Control (CON) 2 15,247 University of Cambridge 2008-01-07 [cDNA Array] MRC MGU Harwell NIA 15K Spotted cDNA Microarray (GPL6025) RNA Mesocricetus auratus
Mesocricetus auratus		 pooled pinealectomised testes control testes
3 GSM254823 Pinealectomised (PX):Control (CON) 3 15,247 University of Cambridge 2008-01-07 [cDNA Array] MRC MGU Harwell NIA 15K Spotted cDNA Microarray (GPL6025) RNA Mesocricetus auratus
Mesocricetus auratus		 pooled control testes pinealectomised testes
4 GSM346610 Mouse Lung Fibroblasts (MLF) lincRNA Expression_rep1 2,130,447 Broad Institute 2008-11-29 [Tiling Array] Mouse lincRNA Tiling Array (HD2 Platform) (GPL7706) RNA Mus musculus
Mus musculus		 pooled Mouse lung Fibroblasts
5 GSM894315 Tumor DNA from skin tumor epithelium 1.1 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
6 GSM894316 Tumor DNA from skin tumor epithelium 2.1 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
7 GSM894317 Tumor DNA from skin tumor epithelium 2.2 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
8 GSM894318 Tumor DNA from skin tumor epithelium 3.1 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
9 GSM894319 Tumor DNA from skin tumor epithelium 3.2 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
10 GSM894320 Tumor DNA from skin tumor epithelium 4.1 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
11 GSM894321 Tumor DNA from skin tumor epithelium 4.2 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
12 GSM894322 Tumor DNA from skin tumor epithelium 5.1 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
13 GSM894323 Tumor DNA from skin tumor epithelium 5.2 2,090,470 University of Lausanne 2012-03-13 [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) genomic Mus musculus
Mus musculus		 pooled Tumor DNA from skin tumor epithelium Brain
14 GSM545815 Nestin1 1,256,831 Albert Einstein College of Medicine 2010-05-20 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled Nestin bone-marrow GFP+ cells
15 GSM545816 Nestin2 1,256,831 Albert Einstein College of Medicine 2010-05-20 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled Nestin bone-marrow GFP+ cells
16 GSM545817 Nestin3 1,256,831 Albert Einstein College of Medicine 2010-05-20 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled Nestin bone-marrow GFP+ cells
17 GSM400446 macrophage bone marrow 0hr 51 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled macrophage_bone_marrow_0hr
18 GSM400447 macrophage bone marrow 0hr 52 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled macrophage_bone_marrow_0hr
19 GSM400448 macrophage bone marrow 2hr LPS 53 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled macrophage_bone_marrow_2hr_LPS
20 GSM400449 macrophage bone marrow 2hr LPS 54 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus		 pooled macrophage_bone_marrow_2hr_LPS
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