Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1000067 LICR_ChipSeq_Testis_H3K36me3_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Testis
2 GSM1000078 LICR_ChipSeq_Testis_H3K4me1_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Testis
3 GSM1000079 LICR_ChipSeq_Testis_H3K4me3_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Testis
4 GSM1000081 LICR_ChipSeq_Testis_H3K27ac_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Testis
5 GSM1000132 LICR_ChipSeq_Placenta_H3K4me3_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 placenta Placenta
6 GSM1000133 LICR_ChipSeq_Placenta_H3K4me1_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 placenta Placenta
7 GSM1000134 LICR_ChipSeq_Placenta_H3K27ac_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 placenta Placenta
8 GSM1000145 LICR_ChipSeq_Testis_H3K27me3_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Testis
9 GSM1000203 LICR_ChipSeq_Testis_Input_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Testis
10 GSM1000207 LICR_ChipSeq_Placenta_Input_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 placenta Placenta
11 GSM1000565 CSHL_RnaSeq_Placenta_adult-8wks 0 UCSC ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 placenta Placenta
12 GSM1020648 mouse_a_testes 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis mouse_testes
13 GSM1020656 mouse_b_testes 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis mouse_testes
14 GSM1020665 mouse_c_testes 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis mouse_testes
15 GSM1020674 rat_a_testes 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus		 testis rat_testes
16 GSM1020683 rat_b_testes 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus		 testis rat_testes
17 GSM1020692 rat_c_testes 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus		 testis rat_testes
18 GSM1027242 WT rep1 0 University of California, San Diego 2012-10-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Primordial germ cells
19 GSM1027243 WT rep2 0 University of California, San Diego 2012-10-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Primordial germ cells
20 GSM1027244 WT rep3 0 University of California, San Diego 2012-10-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 testis Primordial germ cells
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