Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(26,629)		   Primates
(89)		   Rodents
(7,361)		   Mammals
(611)		   Vertebrates
(768)		   Invertebrates
(2,131)		   Plants
(2,683)		   Bacteria
(1,241)		   Viruses
(236)		   Phages
(0)		   Unclassified
(653)		   All
(42,486)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(3,693)		   Tiling Array
(212)		   cDNA Array
(35)		   Oligo Array
(1,709)		   Bead Array
(1,250)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(78)		   HT-Seq
(375)		   Other
(9)		   All
(7,361)		  
  brain
(1,278)		   blood
(1,061)		   connective
(513)		   reproductive
(273)		   muscular
(285)		   digestive
(231)		   liver
(438)		   lung
(168)		   urinary
(293)		   endo/exo-crine
(376)		   embryo
(515)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(355)		   unclassified
(1,575)		   all
(7,361)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM691600 Expt2_0hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt2_0hr Methyl-depleted fraction from Expt2_0hr title:Expt2_0hr
2 GSM691616 Expt2_24hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt2_24hr Methyl-depleted fraction from Expt2_24hr title:Expt2_24hr
3 GSM691629 Expt2_36hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt2_36hr Methyl-depleted fraction from Expt2_36hr title:Expt2_36hr
4 GSM691652 Expt5_0hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt5_0hr Methyl-depleted fraction from Expt5_0hr title:Expt5_0hr
5 GSM691668 Expt5_24hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt5_24hr Methyl-depleted fraction from Expt5_24hr title:Expt5_24hr
6 GSM691691 Expt5_36hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt5_36hr Methyl-depleted fraction from Expt5_36hr title:Expt5_36hr
7 GSM691705 Expt8_0hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt8_0hr Methyl-depleted fraction from Expt8_0hr title:Expt8_0hr
8 GSM691715 Expt8_24hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt8_24hr Methyl-depleted fraction from Expt8_24hr title:Expt8_24hr
9 GSM691728 Expt8_36hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt8_36hr Methyl-depleted fraction from Expt8_36hr title:Expt8_36hr
10 GSM691745 Expt10_0hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt10_0hr Methyl-depleted fraction from Expt10_0hr title:Expt10_0hr
11 GSM691764 Expt10_24hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt10_24hr Methyl-depleted fraction from Expt10_24hr title:Expt10_24hr
12 GSM691785 Expt10_36hr 2,164,512 Johns Hopkins University School of Medicine 2011-03-15 [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) genomic Mus musculus
Mus musculus		 unclassified source_name:Input fraction from Expt10_36hr Methyl-depleted fraction from Expt10_36hr title:Expt10_36hr
13 GSM700046 H3K9me2 no TGF-b, array 1 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 2 of 4 [2007-08-17_MM8_Economy_02] (GPL7524) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 no TGF-b, array 1
14 GSM700047 H3K9me2 no TGF-b, array 2 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 3 of 4 [2007-08-17_MM8_Economy_03] (GPL7525) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 no TGF-b, array 2
15 GSM700048 H3K9me2 36-hour TGFb, array 1 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 2 of 4 [2007-08-17_MM8_Economy_02] (GPL7524) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 36-hour TGFb, array 1
16 GSM700049 H3K9me2 36-hour TGFb, array 2 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 3 of 4 [2007-08-17_MM8_Economy_03] (GPL7525) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 36-hour TGFb, array 2
17 GSM700050 H3K9me2 no TGF-b, array 1 replicate 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 2 of 4 [2007-08-17_MM8_Economy_02] (GPL7524) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 no TGF-b, array 1 replicate
18 GSM700051 H3K9me2 no TGF-b, array 2 replicate 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 3 of 4 [2007-08-17_MM8_Economy_03] (GPL7525) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 no TGF-b, array 2 replicate
19 GSM700052 H3K9me2 36-hour TGFb, array 1 replicate 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 2 of 4 [2007-08-17_MM8_Economy_02] (GPL7524) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 36-hour TGFb, array 1 replicate
20 GSM700053 H3K9me2 36-hour TGFb, array 2 replicate 2,161,350 Johns Hopkins University 2011-03-31 [Tiling Array] NimbleGen mouse (mm8) whole genome tiling array 3 of 4 [2007-08-17_MM8_Economy_03] (GPL7525) genomic Mus musculus
Mus musculus		 unclassified source_name:ChIP against H3K9me2 Genomic DNA title:H3K9me2 36-hour TGFb, array 2 replicate
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