Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(8,338)
  muscular
(14,417)
  digestive
(5,405)
  liver
(0)
  lung
(10,598)
  urinary
(5,877)
  endo/exo-crine
(0)
  embryo
(10,361)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(0)
  all
(225,055)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM539872 mouse kidney tissue [09-002] 39,728 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
kidney Mouse Kidney
2 GSM1000063 LICR_ChipSeq_Kidney_H3K36me3_adult-8wks 0 ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney Kidney
3 GSM1000077 LICR_ChipSeq_Kidney_H3K27me3_adult-8wks 0 ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney Kidney
4 GSM1000092 LICR_ChipSeq_Kidney_H3K27ac_adult-8wks 0 ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney Kidney
5 GSM1000564 CSHL_RnaSeq_Bladder_adult-8wks 0 ENCODE DCC 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
bladder Bladder
6 GSM1003819 UW_DnaseDgf_Kidney_adult-8wks 0 ENCODE DCC 2012-09-13 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney Kidney
7 GSM1014193 UW_DnaseSeq_Kidney_adult-8wks_C57BL/6 0 ENCODE DCC 2012-10-03 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
kidney Kidney
8 GSM1015153 Mouse kidney 0 University of Toronto 2012-10-04 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney Mouse_kidney_pooled
9 GSM1020643 mouse_a_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney mouse_kidney
10 GSM1020651 mouse_b_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney mouse_kidney
11 GSM1020660 mouse_c_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
kidney mouse_kidney
12 GSM1020669 rat_a_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus
kidney rat_kidney
13 GSM1020678 rat_b_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus
kidney rat_kidney
14 GSM1020687 rat_c_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus
kidney rat_kidney
15 GSM1051156 mouse kidney 0 University of California, San Diego 2012-12-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
kidney mouse kidney
16 GSM1084028 obese surgery 1 0 IUPUI 2013-02-18 [HT Sequencing] AB SOLiD 4 System (Rattus norvegicus) (GPL14980) SRA Rattus norvegicus
Rattus norvegicus
kidney kidney
17 GSM1084029 obese surgery 2 0 IUPUI 2013-02-18 [HT Sequencing] AB SOLiD 4 System (Rattus norvegicus) (GPL14980) SRA Rattus norvegicus
Rattus norvegicus
kidney kidney
18 GSM1084030 obese surgery 3 0 IUPUI 2013-02-18 [HT Sequencing] AB SOLiD 4 System (Rattus norvegicus) (GPL14980) SRA Rattus norvegicus
Rattus norvegicus
kidney kidney
19 GSM1084031 obese surgery 4 0 IUPUI 2013-02-18 [HT Sequencing] AB SOLiD 4 System (Rattus norvegicus) (GPL14980) SRA Rattus norvegicus
Rattus norvegicus
kidney kidney
20 GSM1084032 obese sham 1 0 IUPUI 2013-02-18 [HT Sequencing] AB SOLiD 4 System (Rattus norvegicus) (GPL14980) SRA Rattus norvegicus
Rattus norvegicus
kidney kidney
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