Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(6,053)
  Tiling Array
(284)
  cDNA Array
(717)
  Oligo Array
(2,718)
  Bead Array
(888)
  Protein Array
(0)
  Antibody
(3)
  RT-PCR
(82)
  HT-Seq
(1,149)
  Other
(30)
  All
(12,016)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Cross-platform comparability of microarray data (GSE2458) [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) Paradigm Array Labs 2005-03-29 Mus musculus
Mus musculus
221,184
(27,648 x 8)
8 by_platform
by_series
2 In vivo LPS effects on cardiac endothelial RNA-15K cDNA array (GSE1038) [cDNA Array] 15 K cDNA (GPL980) U.T. Southwestern Medical Center 2004-02-10 Mus musculus
Mus musculus
34,560
(17,280 x 2)
2 by_platform
by_series
3 Round Spermatids and Pachytene Spermatocytes (GSE1768) [cDNA Array] 15k-1/3 (GPL1450) National Institutes of Health 2004-09-15 Mus musculus
Mus musculus
17,280
(5,760 x 3)
3 by_platform
by_series
4 Round Spermatids and Pachytene Spermatocytes (GSE1768) [cDNA Array] 15k-2/3 (GPL1451) National Institutes of Health 2004-09-15 Mus musculus
Mus musculus
17,280
(5,760 x 3)
3 by_platform
by_series
5 Round Spermatids and Pachytene Spermatocytes (GSE1768) [cDNA Array] 15k-3/3 (GPL1452) National Institutes of Health 2004-09-15 Mus musculus
Mus musculus
17,280
(5,760 x 3)
3 by_platform
by_series
6 Fob3b vs F-line (GSE1558) [cDNA Array] 1st 7.5K of NIA-NIH 15K Mouse cDNA set (GPL1341) The Jackson Laboratory 2004-07-12 Mus musculus
Mus musculus
172,800
(17,280 x 10)
4 6 by_platform
by_series
7 Cross-platform comparability of microarray data (GSE2458) [cDNA Array] 2-Spotted cDNA/NIA (GPL1968) Paradigm Array Labs 2005-03-29 Mus musculus
Mus musculus
129,536
(16,192 x 8)
8 by_platform
by_series
8 Systematic expression profiling of the mouse transcriptome using RIKEN cDNA microarrays (GSE3098) [cDNA Array] 20K RIKEN cDNA array (GPL2732) Institute for Molecular Bioscience, Uni of Qld 2005-08-09 Mus musculus
Mus musculus
1,135,582
(19,579 x 58)
18 4 4 4 4 6 2 4 2 4 4 2 by_platform
by_series
9 Fob3b vs F-line (GSE1558) [cDNA Array] 2nd 7.5K of NIA-NIH 15K Mouse cDNA set (GPL1342) The Jackson Laboratory 2004-07-12 Mus musculus
Mus musculus
172,800
(17,280 x 10)
2 8 by_platform
by_series
10 Cross-platform comparability of microarray data (GSE2458) [cDNA Array] 3-Spotted cDNA/NIA (GPL1973) Paradigm Array Labs 2005-03-29 Mus musculus
Mus musculus
123,904
(15,488 x 8)
8 by_platform
by_series
11 effect of age liver (GSE789) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
12 aging in male rat liver (1-7) (GSE790) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
13 GH inj old liver (1-7) (GSE791) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
14 effect of age in male rat fat (1-3) (GSE792) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
15 GH inj old fat (1-3) (GSE793) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
16 aging in male rat muscle (1-3) (GSE794) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
17 GH inj old male rat muscle (1-3) (GSE795) [cDNA Array] 3168 rat cDNA array (GPL542) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
9,504
(3,168 x 3)
3 by_platform
by_series
18 Cross-platform comparability of microarray data (GSE2458) [cDNA Array] 5-Spotted cDNA/NIA (GPL1975) Paradigm Array Labs 2005-03-29 Mus musculus
Mus musculus
110,592
(13,824 x 8)
8 by_platform
by_series
19 DNA vaccination series 1 (GSE1538) [cDNA Array] 6240 rat cDNA array (GPL541) Karolinska Institute 2004-07-02 Rattus norvegicus
Rattus norvegicus
37,440
(6,240 x 6)
6 by_platform
by_series
20 effect of age liver (GSE789) [cDNA Array] 6240 rat cDNA array (GPL541) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
24,960
(6,240 x 4)
4 by_platform
by_series
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