Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,864)
  Tiling Array
(48)
  cDNA Array
(80)
  Oligo Array
(4,122)
  Bead Array
(598)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(19)
  HT-Seq
(85)
  Other
(9)
  All
(7,826)
 
  brain
(0)
  blood
(0)
  connective
(8)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(34)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3)
  unclassified
(35)
  all
(80)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM407054 30 min post-stimulation 1 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone untreated MC3T3 osteoblasts MC3T3 osteoblasts 30 min post-oscillatory fluid flow stimulation
2 GSM407055 30 min post-stimulation 2 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone MC3T3 osteoblasts 30 min post-oscillatory fluid flow stimulation untreated MC3T3 osteoblasts
3 GSM407056 30 min post-stimulation 3 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone untreated MC3T3 osteoblasts MC3T3 osteoblasts 30 min post-oscillatory fluid flow stimulation
4 GSM407057 30 min post-stimulation 4 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone MC3T3 osteoblasts 30 min post-oscillatory fluid flow stimulation untreated MC3T3 osteoblasts
5 GSM407058 1 hour post-stimulation 1 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone untreated MC3T3 osteoblasts MC3T3 osteoblasts 1 hr post-oscillatory fluid flow stimulation
6 GSM407059 1 hour post-stimulation 2 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone MC3T3 osteoblasts 1 hr post-oscillatory fluid flow stimulation untreated MC3T3 osteoblasts
7 GSM407060 1 hour post-stimulation 3 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone untreated MC3T3 osteoblasts MC3T3 osteoblasts 1 hr post-oscillatory fluid flow stimulation
8 GSM407061 1 hour post-stimulation 4 43,008 U. of Texas Health Sci Center at San Antonio 2009-05-22 [cDNA Array] Stanford_MMArray_mouse_43k (GPL8586) RNA Mus musculus
Mus musculus
bone MC3T3 osteoblasts 1 hr post-oscillatory fluid flow stimulation untreated MC3T3 osteoblasts
9 GSM401491 Helper-dependent adenovirus vector treated animal #2 vs mock treated: 1 hour post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 1 hour post-treatment Helper-dependent adenovirus vector treated animal liver: 1 hour post-treatment
10 GSM401492 Adenovirus vector treated animal #2 vs mock treated: 1 hour post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 1 hour post-treatment Adenovirus vector treated animal liver: 1 hour post-treatment
11 GSM401493 Adenovirus vector treated animal #1 vs mock treated: 72 hours post-treatment: technical replicate 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 72 hours post-treatment Adenovirus vector treated animal liver: 72 hours post-treatment
12 GSM401494 Adeno-associated virus vector treated animal #1 vs mock : 4 weeks post-treatment: tech replicate 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 4 weeks post-treatment Adeno-associated virus vector treated animal liver: 4 weeks post-treatment
13 GSM401495 Adeno-associated virus vector treated animal #1 vs mock treated: 1 hour post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 1 hour post-treatment Adeno-associated virus vector treated animal liver: 1 hour post-treatment
14 GSM401496 Adeno-associated virus vector treated animal #2 vs mock: 72 hours post-treatment: tech replicate 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 72 hours post-treatment Adeno-associated virus vector treated animal liver: 72 hours post-treatment
15 GSM401497 Adenovirus vector treated animal #2 vs mock treated: 6 hours post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 6 hours post-treatment Adenovirus vector treated animal liver: 6 hours post-treatment
16 GSM401498 Adenovirus vector treated animal #1 vs mock treated: 6 hours post-treatment: technical replicate 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 6 hours post-treatment Adenovirus vector treated animal liver: 6 hours post-treatment
17 GSM401499 Helper-dependent adenovirus vector treated animal #1 vs mock treated: 72 hours post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 72 hours post-treatment Helper-dependent adenovirus vector treated animal liver: 72 hours post-treatment
18 GSM401500 Adenovirus vector treated animal #1 vs mock treated: 4 weeks post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 4 weeks post-treatment Adenovirus vector treated animal liver: 4 weeks post-treatment
19 GSM401501 Adenovirus vector treated animal #2 vs mock treated: 72 hours post-treatment: technical replicate 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 72 hours post-treatment Adenovirus vector treated animal liver: 72 hours post-treatment
20 GSM401502 Adeno-associated virus vector treated animal #1 vs mock treated: 6 hours post-treatment 42,624 Virginia Commonwealth University 2009-05-11 [cDNA Array] SMD Print_668 Mus musculus (GPL8541) RNA Mus musculus
Mus musculus
liver/hepato Mock treated animal liver: 6 hours post-treatment Adeno-associated virus vector treated animal liver: 6 hours post-treatment
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