Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(2,153)		   blood
(1,222)		   connective
(429)		   reproductive
(411)		   muscular
(785)		   digestive
(304)		   liver
(1,265)		   lung
(555)		   urinary
(448)		   endo/exo-crine
(315)		   embryo
(369)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1,153)		   unclassified
(1,707)		   all
(11,116)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM410917 CHO-WT_DAPTtreated_rep1_vs_S1_DMSOtreated_rep1 17,664 Swiss Federal Institute of Technology 2009-06-02 [cDNA Array] UNI Lausanne Mouse 17K (GPL4371) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:CHO cells treated with DAPT S1 cells treated with DMSO title:CHO-WT_DAPTtreated_rep1_vs_S1_DMSOtreated_rep1 description:CHO cells: abolished g-secretase activity through DAPT (carrier: DMSO) treatment S1 cells: 8fold enhanced g-secretase acitivity through stable NCT,APH1-a2,PS1 and PEN2 overexpression, treated with DAPT carrier DMSO only but not with DAPT
2 GSM410918 CHO-WT_DAPTtreated_rep2_vs_S1_DMSOtreated_rep2 17,664 Swiss Federal Institute of Technology 2009-06-02 [cDNA Array] UNI Lausanne Mouse 17K (GPL4371) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:CHO cells treated with DAPT S1 cells treated with DMSO title:CHO-WT_DAPTtreated_rep2_vs_S1_DMSOtreated_rep2 description:CHO cells: abolished g-secretase activity through DAPT (carrier: DMSO) treatment S1 cells: 8fold enhanced g-secretase acitivity through stable NCT,APH1-a2,PS1 and PEN2 overexpression, treated with DAPT carrier DMSO only but not with DAPT
3 GSM410919 S1_DMSOtreated_rep3_vs_CHO-WT_DAPTtreated_rep3 17,664 Swiss Federal Institute of Technology 2009-06-02 [cDNA Array] UNI Lausanne Mouse 17K (GPL4371) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:S1 cells treated with DMSO CHO cells treated with DAPT title:S1_DMSOtreated_rep3_vs_CHO-WT_DAPTtreated_rep3 description:dye-swap CHO cells: abolished g-secretase activity through DAPT (carrier: DMSO) treatment S1 cells: 8fold enhanced g-secretase acitivity through stable NCT,APH1-a2,PS1 and PEN2 overexpression, treated with DAPT carrier DMSO only but not with DAPT
4 GSM27710 RT210B versus unstable mixture 2, replicate 1 2,304 University of Maryland, Baltimore 2004-07-30 [cDNA Array] GeneMap Human CancerArray (GPL1387) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:RT210B Fe10-3/10-56-11 title:RT210B versus unstable mixture 2, replicate 1 description:Equal quantities of unstable clones Fe10-3 and 10-56-11 tested versus RT210B (stable) Normalization factor of 1.169
5 GSM27711 RT210B versus unstable mixture 2, replicate 2 2,304 University of Maryland, Baltimore 2004-07-30 [cDNA Array] GeneMap Human CancerArray (GPL1387) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:RT210B Fe10-3/10-56-11 title:RT210B versus unstable mixture 2, replicate 2 description:Equal quantities of unstable clones Fe10-3 and 10-56-11 tested versus RT210B (stable)
6 GSM27712 RT210B versus unstable mixture 1, replicate 1 2,304 University of Maryland, Baltimore 2004-07-30 [cDNA Array] GeneMap Human CancerArray (GPL1387) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:RT210B LS12/10-107-9 title:RT210B versus unstable mixture 1, replicate 1 description:Equal quantities of unstable clones LS12 and 10-107-9 tested versus RT210B (stable)
7 GSM27713 RT210B versus unstable mixture 1, replicate 2 2,304 University of Maryland, Baltimore 2004-07-30 [cDNA Array] GeneMap Human CancerArray (GPL1387) RNA Cricetulus griseus
Cricetulus griseus		 unclassified source_name:RT210B LS12/10-107-9 title:RT210B versus unstable mixture 1, replicate 2 description:Equal quantities of unstable clones LS12 and 10-107-9 tested versus RT210B (stable) normalization factor of 3.8
8 GSM6702 Total RNA, 0.1ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
9 GSM6703 Total RNA, 0.25ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
10 GSM6704 Total RNA, 0.5ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
11 GSM6705 Total RNA, 1ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
12 GSM6706 Total RNA, 2ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
13 GSM6707 Total RNA, 5ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
14 GSM6708 Total RNA, 10ug 5,544 Georgetown University 2003-05-22 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
15 GSM6723 WC1a, Total RNA 5,544 Georgetown University 2003-05-23 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
16 GSM6724 WC1b, Total RNA 5,544 Georgetown University 2003-05-23 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
17 GSM6725 WC2a, Total RNA 5,544 Georgetown University 2003-05-23 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
18 GSM6727 WC2b, Total RNA 5,544 Georgetown University 2003-05-23 [cDNA Array] GF200 (ResGen) (GPL312) RNA Marmota monax
Marmota monax		 liver/hepato Total RNA - liver
19 GSM254821 Pinealectomised (PX):Control (CON) 1 15,247 University of Cambridge 2008-01-07 [cDNA Array] MRC MGU Harwell NIA 15K Spotted cDNA Microarray (GPL6025) RNA Mesocricetus auratus
Mesocricetus auratus		 pooled pinealectomised testes control testes
20 GSM254822 Pinealectomised (PX):Control (CON) 2 15,247 University of Cambridge 2008-01-07 [cDNA Array] MRC MGU Harwell NIA 15K Spotted cDNA Microarray (GPL6025) RNA Mesocricetus auratus
Mesocricetus auratus		 pooled pinealectomised testes control testes
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