Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)
  Primates
(5,069)
  Rodents
(189,292)
  Mammals
(16,929)
  Vertebrates
(18,759)
  Invertebrates
(38,793)
  Plants
(93,301)
  Bacteria
(39,613)
  Viruses
(1,263)
  Phages
(101)
  Unclassified
(5,497)
  All
(931,947)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(532)
  Tiling Array
(47)
  cDNA Array
(1,208)
  Oligo Array
(2,269)
  Bead Array
(576)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(771)
  Other
(82)
  All
(5,497)
 
  brain
(0)
  blood
(15)
  connective
(24)
  reproductive
(0)
  muscular
(0)
  digestive
(4)
  liver
(0)
  lung
(7)
  urinary
(0)
  endo/exo-crine
(23)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(8)
  unclassified
(451)
  all
(532)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM994499 PAHM4 LB-37C tech01 5,900 Emory University 2012-08-29 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:PAHM4 grown at 37C in LB title:PAHM4 LB-37C tech01
2 GSM994500 PAHM4 LB-37C tech02 5,900 Emory University 2012-08-29 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:PAHM4 grown at 37C in LB title:PAHM4 LB-37C tech02
3 GSM994501 PAHM4 LB-37C tech03 5,900 Emory University 2012-08-29 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:PAHM4 grown at 37C in LB title:PAHM4 LB-37C tech03
4 GSM984622 Contents of foregut beetle 1 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:foregut section title:Contents of foregut beetle 1
5 GSM984623 Contents of midgut beetle 1 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
intestine midgut section
6 GSM984624 Contents of anterior hindgut beetle 1 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:anterior hindgut section title:Contents of anterior hindgut beetle 1
7 GSM984625 Contents of posterior hindgut beetle 1 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:posterior hindgut section title:Contents of posterior hindgut beetle 1
8 GSM984626 Contents of foregut beetle 2 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:foregut section title:Contents of foregut beetle 2
9 GSM984627 Contents of midgut beetle 2 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
intestine midgut section
10 GSM984628 Contents of anterior hindgut beetle 2 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:anterior hindgut section title:Contents of anterior hindgut beetle 2
11 GSM984629 Contents of posterior hindgut beetle 2 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:posterior hindgut section title:Contents of posterior hindgut beetle 2
12 GSM984630 Contents of foregut beetle 3 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:foregut section title:Contents of foregut beetle 3
13 GSM984631 Contents of midgut beetle 3 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
intestine midgut section
14 GSM984632 Contents of anterior hindgut beetle 3 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:anterior hindgut section title:Contents of anterior hindgut beetle 3
15 GSM984633 Contents of posterior hindgut beetle 3 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:posterior hindgut section title:Contents of posterior hindgut beetle 3
16 GSM984634 Contents of foregut beetle 4 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:foregut section title:Contents of foregut beetle 4
17 GSM984635 Contents of midgut beetle 4 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
intestine midgut section
18 GSM984636 Contents of anterior hindgut beetle 4 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:anterior hindgut section title:Contents of anterior hindgut beetle 4
19 GSM984637 Contents of posterior hindgut beetle 4 8,741 University of California, Berkeley 2012-08-13 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) RNA unidentified,metagenomes
unidentified,metagenomes
unclassified source_name:posterior hindgut section title:Contents of posterior hindgut beetle 4
20 GSM928997 CRS002 1,691 University of California at San Francisco 2012-05-08 [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (GPL15537) genomic Homo sapiens,unidentified
Homo sapiens,unidentified
unclassified source_name:mucosal brushing, CRS title:CRS002 description:16S ribosomal RNA gene is amplified for phylogenetic profiling.
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