Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(9,415)		   Primates
(146)		   Rodents
(6,860)		   Mammals
(282)		   Vertebrates
(526)		   Invertebrates
(1,776)		   Plants
(2,898)		   Bacteria
(1,674)		   Viruses
(30)		   Phages
(1)		   Unclassified
(143)		   All
(23,779)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(11)		   Tiling Array
(7)		   cDNA Array
(32)		   Oligo Array
(53)		   Bead Array
(3)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(36)		   Other
(1)		   All
(143)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Transcriptome Profiling of Xanthomonas oryzae pv. oryzae knockout mutants at different hybridization conditions and PMTs (GSE9643) [Oligo Array] UCD_Ronald_XOarray_5K_V1.0 (GPL6123) University of California, Davis 2007-11-19 unidentified
unidentified		 362,880
(10,080 x 36) 		36 by_platform
by_series
2 Thyroid hormone induced resorption of tail in Xenopus laevis tadpole (GSE3405) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified		 269,328
(22,444 x 12) 		12 by_platform
by_series
3 Thyroid hormone induced changes in Xenopus laevis tadpole limb bud (GSE3404) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified		 269,328
(22,444 x 12) 		12 by_platform
by_series
4 Thyroid hormone induced changes in Xenopus laevis tadpole brain (GSE3402) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified		 201,996
(22,444 x 9) 		9 by_platform
by_series
5 Therapeutics of Ebola hemorrhagic fever: Whole-genome transcriptional analysis of successful disease mitigation (GSE24943) [Oligo Array] SFGF HEEBO Human Set v1.00 with custom orthopox oligos (GPL9700) Boston University School of Medicine 2010-10-26 Macaca mulatta,Homo sapiens
Macaca mulatta,Homo sapiens		 4,350,346
(47,806 x 91) 		91 by_platform
by_series
6 The rpoS transcriptome of Pseudomonas protegens Pf-5 grown in rich medium (GSE38632) [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) USDA-ARS 2012-06-11 Pseudomonas,unidentified
Pseudomonas,unidentified		 139,392
(23,232 x 6) 		6 by_platform
by_series
7 The rpoS transcriptome of Pseudomonas protegens Pf-5 growing on pea seed surfaces (GSE38631) [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 28k v2.0 (GPL7621) USDA-ARS 2012-06-11 Pseudomonas,unidentified
Pseudomonas,unidentified		 165,888
(27,648 x 6) 		6 by_platform
by_series
8 The role of nucleosome positioning in the evolution of gene regulation (GSE21960) [Oligo Array] Agilent Custom Gene Expression Array for Saccharomyces castellii (GPL10501) MIT 2010-05-21 unidentified
unidentified		 22,752
(5,688 x 4) 		4 by_platform
by_series
9 The relationship between inhibition of gastric acid secretion and eradication of Helicobacter pylori (GSE39512) [Oligo Array] Agilent-031749 Hp695 3 probes [Probe Name version] (GPL15831) UCLA/VA GLAHS 2012-07-19 Helicobacter pylori,unidentified
Helicobacter pylori,unidentified		 106,040
(4,820 x 22) 		22 by_platform
by_series
10 The GacA transcriptome of Pseudomonas protegens Pf-5 growing on pea seed surfaces (GSE38630) [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 28k v2.0 (GPL7621) USDA-ARS 2012-06-11 Pseudomonas,unidentified
Pseudomonas,unidentified		 165,888
(27,648 x 6) 		6 by_platform
by_series
11 Temporal expression profile of primary CD8+ T cell activation (GSE7572) [Oligo Array] Agilent-012097 Human 1A Microarray (V2) G4110B (Feature Number version) (GPL887) University of Delaware 2007-04-22 Homo sapiens,Thymus
Homo sapiens,Thymus		 835,275
(22,575 x 37) 		37 by_platform
by_series
12 Temporal expression profile of primary CD4+ T cell activation (GSE7571) [Oligo Array] Agilent-012097 Human 1A Microarray (V2) G4110B (Feature Number version) (GPL887) University of Delaware 2007-04-22 Homo sapiens,Thymus
Homo sapiens,Thymus		 835,275
(22,575 x 37) 		37 by_platform
by_series
13 Structural variation of the gorilla genome (GSE27072) [Oligo Array] Eichler-NimbleGen Human 2.1 HD2 CGH chip (GPL9684) University of Washington 2011-02-04 Homo sapiens,Gorilla gorilla
Homo sapiens,Gorilla gorilla		 4,350,144
(2,175,072 x 2) 		2 by_platform
by_series
14 Spalax gene expression profiling of muscle and brain under hypoxia (GSE37619) [Oligo Array] University of Illinois/Haifa University Spalax galili Agilent 8x15K microarray (GPL15478) University of Illinois 2012-04-26 Nannospalax,unidentified
Nannospalax,unidentified		 244,112
(15,257 x 16) 		8 8 by_platform
by_series
15 Seeking novel mammalian genes using transcript profiling and genotyping of a human radiation hybrid panel (GSE19003) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Probe name version) (GPL9128) UCLA 2009-11-12 Homo sapiens,Cricetulus griseus
Homo sapiens,Cricetulus griseus		 18,910,800
(236,385 x 80) 		80 by_platform
by_series
16 Phytoplankton community composition and gene expression involved in carbon and nitrogen assimilation (GSE12742) [Oligo Array] Princeton Biocomplexity Project, BC007 and BC008 (GPL7261) Princeton University 2008-09-11 uncultured organism,unidentified
uncultured organism,unidentified		 893
(47 x 19) 		19 by_platform
by_series
17 Peripheral blood stem cell microRNA profiling (GSE11248) [Oligo Array] CCDTM miRNA700-V3 (GPL6773) CC/NIH 2008-04-23 Homo sapiens,Human herpesvirus 4
Homo sapiens,Human herpesvirus 4		 59,696
(1,456 x 41) 		29 12 by_platform
by_series
18 Peripheral blood stem cell gene and microRNA profiling (GSE11255) [Oligo Array] CCDTM miRNA700-V3 (GPL6773) CC/NIH 2008-04-24 Homo sapiens,Human herpesvirus 4
Homo sapiens,Human herpesvirus 4		 59,696
(1,456 x 41) 		29 12 by_platform
by_series
19 p53 regulates viral gene expression during infection with human cytomegalovirus (GSE13437) [Oligo Array] University of Idaho_Fortunato_homo-HHV5_2240 (GPL7474) University of Idaho 2008-11-03 unidentified
unidentified		 40,320
(2,240 x 18) 		18 by_platform
by_series
20 Mycobacterium tuberculosis Requires Phosphate-Responsive Gene Regulation to Resist Host Immunity (GSE36998) [Oligo Array] Voskuil Lab Mycobacterium tuberculosis Operon Microarray (GPL15398) University of Colorado Denver 2012-04-03 unidentified
unidentified		 49,555
(4,505 x 11) 		11 by_platform
by_series
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