Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(14,610)		   Primates
(31)		   Rodents
(3,498)		   Mammals
(2,457)		   Vertebrates
(716)		   Invertebrates
(579)		   Plants
(6,810)		   Bacteria
(592)		   Viruses
(6)		   Phages
(0)		   Unclassified
(31)		   All
(29,374)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(4)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(3)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(12)		   Other
(0)		   All
(31)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(3)		   all
(3)		  
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM245992 Laccaria/Populus ECM in vitro 44,588 INRA 2007-11-30 [Oligo Array] INRA Laccaria bicolor whole genome expression array 45K version 1 (GPL6192) RNA unidentified
unidentified		 unclassified source_name:one-month old Laccaria/Populus ectomycorrizal tissue title:Laccaria/Populus ECM in vitro description:Laccaria/Populus ECM in vitro
2 GSM1090078 100ng 16S rRNA gene amplicon of a mock community 4,441 EA 4678 CIDAM 2013-02-28 [Oligo Array] Agilent Human gut metagenome array (GPL16731) other unidentified
unidentified		 unclassified source_name:Mock community title:100ng 16S rRNA gene amplicon of a mock community description:16S rRNA gene amplified from gDNA extracted from bacterial strains. Sample name: Mock community
3 GSM537090 Synthetic genes and sheep rumen content 3,392 CNRS - Blaise Pascal University 2010-04-23 [Oligo Array] Nimblegen_Custom_Chloroethene_array_V01 (GPL10353) RNA synthetic construct,uncultured organism
synthetic construct,uncultured organism		 unclassified source_name:10^11 copies of mmoC, vcrA and tceA aRNA mixed with antisense mRNA from rumen (6µg) title:Synthetic genes and sheep rumen content description:Antisense RNAs (aRNAs) were produced by in vitro transcription from pGH vector containing the entire mmoC, tceA and vcrA genes sequences (synthesized by Biomatik Corporation (USA))
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