Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(532)
  Tiling Array
(44)
  cDNA Array
(1,208)
  Oligo Array
(2,102)
  Bead Array
(576)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(762)
  Other
(6)
  All
(5,242)
 
  brain
(65)
  blood
(244)
  connective
(42)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(59)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(36)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(71)
  unclassified
(1,466)
  all
(2,102)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM80493 non-contaminated soil_rep1 202 Catholic University of Louvain 2005-10-28 [Oligo Array] 16S and 23S rRNA CodeLink Microarray (GPL3032) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an uncontaminated soil sample title:non-contaminated soil_rep1 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
2 GSM80494 non-contaminated soil_rep2 202 Catholic University of Louvain 2005-10-28 [Oligo Array] 16S and 23S rRNA CodeLink Microarray (GPL3032) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an uncontaminated soil sample title:non-contaminated soil_rep2 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
3 GSM80495 non-contaminated soil_rep3 202 Catholic University of Louvain 2005-10-28 [Oligo Array] 16S and 23S rRNA CodeLink Microarray (GPL3032) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an uncontaminated soil sample title:non-contaminated soil_rep3 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
4 GSM80496 TNT-contaminated soil_rep1 202 Catholic University of Louvain 2005-10-28 [Oligo Array] 16S and 23S rRNA CodeLink Microarray (GPL3032) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an TNT-contaminated soil sample title:TNT-contaminated soil_rep1 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
5 GSM80497 TNT-contaminated soil_rep2 202 Catholic University of Louvain 2005-10-28 [Oligo Array] 16S and 23S rRNA CodeLink Microarray (GPL3032) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an TNT-contaminated soil sample title:TNT-contaminated soil_rep2 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
6 GSM80498 TNT-contaminated soil_rep3 202 Catholic University of Louvain 2005-10-28 [Oligo Array] 16S and 23S rRNA CodeLink Microarray (GPL3032) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an TNT-contaminated soil sample title:TNT-contaminated soil_rep3 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
7 GSM79776 Uncontaminated soil_rep1 270 Catholic University of Louvain 2005-10-24 [Oligo Array] 16S and 23S rRNA Gel Pad Microarray (GPL2993) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an uncontaminated soil sample title:Uncontaminated soil_rep1 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
8 GSM79777 Uncontaminated soil_rep2 270 Catholic University of Louvain 2005-10-24 [Oligo Array] 16S and 23S rRNA Gel Pad Microarray (GPL2993) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an uncontaminated soil sample title:Uncontaminated soil_rep2 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
9 GSM79778 Uncontaminated soil_rep3 270 Catholic University of Louvain 2005-10-24 [Oligo Array] 16S and 23S rRNA Gel Pad Microarray (GPL2993) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an uncontaminated soil sample title:Uncontaminated soil_rep3 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
10 GSM79779 2,4,6-trinitrotoluene (TNT)-contaminated soil_rep1 270 Catholic University of Louvain 2005-10-24 [Oligo Array] 16S and 23S rRNA Gel Pad Microarray (GPL2993) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an TNT-contaminated soil sample title:2,4,6-trinitrotoluene (TNT)-contaminated soil_rep1 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
11 GSM79780 2,4,6-trinitrotoluene (TNT)-contaminated soil_rep2 270 Catholic University of Louvain 2005-10-24 [Oligo Array] 16S and 23S rRNA Gel Pad Microarray (GPL2993) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an TNT-contaminated soil sample title:2,4,6-trinitrotoluene (TNT)-contaminated soil_rep2 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
12 GSM79781 2,4,6-trinitrotoluene (TNT)-contaminated soil_rep3 270 Catholic University of Louvain 2005-10-24 [Oligo Array] 16S and 23S rRNA Gel Pad Microarray (GPL2993) genomic unidentified
unidentified
unclassified source_name:In vitro transcribed product of 16S rDNA amplified from an TNT-contaminated soil sample title:2,4,6-trinitrotoluene (TNT)-contaminated soil_rep3 description:Dissociation curves were generated by increasing the temperature of the microarray (1°C/min) from 20°C to 68°C and recording signal intensities every 1°C or 2°C (Urakawa et al. 2003, Appl. Environ. Microbiol. 68:235-244).
13 GSM237693 Environmental DNA + Prochloro 9312, 10^1 cells/ml 428 University of Arizona 2007-10-16 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9312, 10^1 cells/ml. title:Environmental DNA + Prochloro 9312, 10^1 cells/ml description:Environmental DNA with added Prochlorococcus strain 9312, 10^1 cells/ml.
14 GSM237694 Environmental DNA + Prochloro 9312, 10^2 cells/ml 428 University of Arizona 2007-10-16 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9312, 10^2 cells/ml title:Environmental DNA + Prochloro 9312, 10^2 cells/ml description:Environmental DNA with added Prochlorococcus strain 9312, 10^2 cells/ml
15 GSM237695 Environmental DNA + Prochloro 9312, 10^3 cells/ml 428 University of Arizona 2007-10-16 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9312, 10^3 cells/ml. title:Environmental DNA + Prochloro 9312, 10^3 cells/ml description:Environmental DNA with added Prochlorococcus strain 9312, 10^3 cells/ml
16 GSM237696 Environmental DNA + Prochloro 9312, 10^4 cells/ml 428 University of Arizona 2007-10-16 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9312, 10^4 cells/ml. title:Environmental DNA + Prochloro 9312, 10^4 cells/ml description:Environmental DNA with added Prochlorococcus strain 9312, 10^4 cells/ml.
17 GSM237890 Environmental DNA + Prochloro 9312, 10^5 cells/ml 428 University of Arizona 2007-10-16 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9312, 10^5 cells/ml. title:Environmental DNA + Prochloro 9312, 10^5 cells/ml description:Environmental DNA with added Prochlorococcus strain 9312, 10^5 cells/ml.
18 GSM237891 Environmental DNA + Prochloro 9312, 10^6 cells/ml 428 University of Arizona 2007-10-16 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9312, 10^6 cells/ml. title:Environmental DNA + Prochloro 9312, 10^6 cells/ml description:Environmental DNA with added Prochlorococcus strain 9312, 10^6 cells/ml.
19 GSM238729 Environmental DNA + Prochloro 9313, 10^1 cells/ml 428 University of Arizona 2007-10-19 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9313, 10^1 cells/ml. title:Environmental DNA + Prochloro 9313, 10^1 cells/ml description:Environmental DNA with added Prochlorococcus strain 9313, 10^1 cells/ml.
20 GSM238733 Environmental DNA + Prochloro 9313, 10^2 cells/ml 428 University of Arizona 2007-10-19 [Oligo Array] A genome proxy array for profiling marine micobial communities (GPL6012) genomic unidentified
unidentified
unclassified source_name:Environmental DNA with added Prochlorococcus strain 9313, 10^2 cells/ml title:Environmental DNA + Prochloro 9313, 10^2 cells/ml description:Environmental DNA with added Prochlorococcus strain 9313, 10^2 cells/ml
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