Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(23)
  Tiling Array
(11)
  cDNA Array
(71)
  Oligo Array
(177)
  Bead Array
(4)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(122)
  Other
(23)
  All
(433)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 High-resolution “tiling” expression data for Zymomonas mobilis ZM4 (GSE51870) [Tiling Array] 091006_AD_ZM4_2_1M_exp_HX1 (GPL17859) Lawrence Berkeley Lab 2013-10-29 Zymomonas mobilis subsp. mobilis,unidentified
Zymomonas mobilis subsp. mobilis,unidentified
9,352,215
(1,870,443 x 5)
5 by_platform
by_series
2 Lytic infection of Lactococcus lactis by bacteriophages Tuc2009 and c2 trigger alternative transcriptional host responses (GSE45655) [Tiling Array] Agilent-032729 (Lactococcus lactis subsp. cremoris UC509.9, Lactococcus phage Tuc2009, Lactococcus phage c2) (GPL16934) Radboud University Medical Centre 2013-03-31 Lactococcus lactis,unidentified
Lactococcus lactis,unidentified
1,356,600
(45,220 x 30)
30 by_platform
by_series
3 A unique herpesviral transcriptional program in KSHV-infected lymphatic endothelial cells leads to mTORC1 activation and rapamycin sensitivity (GSE45600) [Tiling Array] Agilent-029238 KSHV tiling microarray (GPL16894) Novartis Institutes for BioMedical Research 2013-03-28 unidentified,Homo sapiens,Human herpesvirus 8
unidentified,Homo sapiens,Human herpesvirus 8
165,720
(13,810 x 12)
4 8 by_platform
by_series
4 Mock and stably infected rKSHV.219 cells (LEC, BEC, HUVEC, and HAEC) [Expt2] (GSE45591) [Tiling Array] Agilent-029238 KSHV tiling microarray (GPL16894) Novartis Institutes for BioMedical Research 2013-03-28 unidentified,Homo sapiens,Human herpesvirus 8
unidentified,Homo sapiens,Human herpesvirus 8
110,480
(13,810 x 8)
4 4 by_platform
by_series
5 Mock and stably infected rKSHV.219 cells (LEC and BEC) [Expt1] (GSE45590) [Tiling Array] Agilent-029238 KSHV tiling microarray (GPL16894) Novartis Institutes for BioMedical Research 2013-03-28 unidentified,Homo sapiens,Human herpesvirus 8
unidentified,Homo sapiens,Human herpesvirus 8
55,240
(13,810 x 4)
4 by_platform
by_series
6 Mock, latent, and lytic rKSHV.219-infected iSLK cells [Expt3] (GSE45599) [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) Novartis Institutes for BioMedical Research 2013-03-28 unidentified,Homo sapiens,Human herpesvirus 8
unidentified,Homo sapiens,Human herpesvirus 8
41,238
(13,746 x 3)
3 by_platform
by_series
7 A unique herpesviral transcriptional program in KSHV-infected lymphatic endothelial cells leads to mTORC1 activation and rapamycin sensitivity (GSE45600) [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) Novartis Institutes for BioMedical Research 2013-03-28 unidentified,Homo sapiens,Human herpesvirus 8
unidentified,Homo sapiens,Human herpesvirus 8
41,238
(13,746 x 3)
3 by_platform
by_series
8 Array-Painting with Hoolock sorted chromosomes (GSE40024) [Tiling Array] Human 32k tiling BAC array (GPL15909) Oregon Health & Science University 2012-08-09 Bunopithecus hoolock leuconedys,Homo sapiens
Bunopithecus hoolock leuconedys,Homo sapiens
168,400
(33,680 x 5)
5 by_platform
by_series
9 High-resolution analysis of RNA expression in Desulfovbrio alaskensis G20 (GSE39471) [Tiling Array] NimbleGen Custom Desulfovibrio alaskensis G20 Tiling [NimbleGen_G20_2082K_1] (GPL15824) Lawrence Berkeley Lab 2012-07-18 Desulfovibrio,unidentified
Desulfovibrio,unidentified
6,017,454
(2,005,818 x 3)
3 by_platform
by_series
10 Mock or latently infected KSHV cells (BCBL, SLK and HFF) (GSE20443) [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) UCSF 2010-02-22 Homo sapiens,unidentified
Homo sapiens,unidentified
164,952
(13,746 x 12)
10 2 by_platform
by_series
11 Gene expression "Epigenomic modifications predict active promoters and gene structure in Toxoplasma gondii" (GSE5989) [Tiling Array] Toxoplasma gondii Chromosome 1b 1230000-1880000 tiling array (GPL4397) Albert Einstein College of Medicine 2006-10-07 Toxoplasma gondii RH,Homo sapiens
Toxoplasma gondii RH,Homo sapiens
38,985
(12,995 x 3)
3 by_platform
by_series