Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(532)		   Tiling Array
(47)		   cDNA Array
(1,208)		   Oligo Array
(2,269)		   Bead Array
(576)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(771)		   Other
(82)		   All
(5,497)		  
  brain
(0)		   blood
(14)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(10)		   unclassified
(23)		   all
(47)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM969824 G20_LS 2,005,818 Lawrence Berkeley Lab 2012-07-18 [Tiling Array] NimbleGen Custom Desulfovibrio alaskensis G20 Tiling [NimbleGen_G20_2082K_1] (GPL15824) RNA Desulfovibrio,unidentified
Desulfovibrio,unidentified		 unclassified source_name:G20 grown in lactate/sulfate media supplemented with yeast extract (LS) title:G20_LS description:Mid-log phase G20 in LS, 1 biological replicate
2 GSM969825 G20_LS4D 2,005,818 Lawrence Berkeley Lab 2012-07-18 [Tiling Array] NimbleGen Custom Desulfovibrio alaskensis G20 Tiling [NimbleGen_G20_2082K_1] (GPL15824) RNA Desulfovibrio,unidentified
Desulfovibrio,unidentified		 unclassified source_name:G20 grown in defined lactate/sulfate media (LS4D) title:G20_LS4D description:Mid-log phase G20 in LS4D, 1 biological replicate
3 GSM969826 G20_Genomic 2,005,818 Lawrence Berkeley Lab 2012-07-18 [Tiling Array] NimbleGen Custom Desulfovibrio alaskensis G20 Tiling [NimbleGen_G20_2082K_1] (GPL15824) genomic Desulfovibrio,unidentified
Desulfovibrio,unidentified		 unclassified source_name:genomic DNA control title:G20_Genomic description:genomic DNA control
4 GSM289217 HzHL60_1 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Homo sapiens,Anaplasma phagocytophilum HZ
Homo sapiens,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzHL60_1 description:Expression profiling of Ap Hz-infected human cell line
5 GSM289218 HzHL60_2 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Homo sapiens,Anaplasma phagocytophilum HZ
Homo sapiens,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzHL60_2 description:Expression profiling of Ap Hz-infected human cell line
6 GSM289219 HzHL60_3 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Homo sapiens,Anaplasma phagocytophilum HZ
Homo sapiens,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzHL60_3 description:Expression profiling of Ap Hz-infected human cell line
7 GSM289220 HzHMEC_1 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Homo sapiens,Anaplasma phagocytophilum HZ
Homo sapiens,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzHMEC_1 description:Expression profiling of Ap Hz-infected human cell line
8 GSM289221 HzHMEC_2 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Homo sapiens,Anaplasma phagocytophilum HZ
Homo sapiens,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzHMEC_2 description:Expression profiling of Ap Hz-infected human cell line
9 GSM289222 HzHMEC_3 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Homo sapiens,Anaplasma phagocytophilum HZ
Homo sapiens,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzHMEC_3 description:Expression profiling of Ap Hz-infected human cell line
10 GSM289223 HzISE6_1 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Ixodes scapularis,Anaplasma phagocytophilum HZ
Ixodes scapularis,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzISE6_1 description:Expression profiling of Ap Hz-infected tick cell line
11 GSM289224 HzISE6_2 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Ixodes scapularis,Anaplasma phagocytophilum HZ
Ixodes scapularis,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzISE6_2 description:Expression profiling of Ap Hz-infected tick cell line
12 GSM289225 HzISE6_3 257,944 Michael Herron 2008-05-16 [Tiling Array] UMNENT Anaplasma phagocytophilum Hz whole genome tiling array 256K (GPL6869) RNA Ixodes scapularis,Anaplasma phagocytophilum HZ
Ixodes scapularis,Anaplasma phagocytophilum HZ		 unclassified source_name:Cell Culture title:HzISE6_3 description:Expression profiling of Ap Hz-infected tick cell line
13 GSM983885 Hoolock_poolA 33,680 Oregon Health & Science University 2012-08-09 [Tiling Array] Human 32k tiling BAC array (GPL15909) genomic Bunopithecus hoolock leuconedys,Homo sapiens
Bunopithecus hoolock leuconedys,Homo sapiens		 unclassified source_name:Hoolock_sorted chromosomes Human reference DNA title:Hoolock_poolA description:HLE_PoolA
14 GSM983886 Hoolock_poolB 33,680 Oregon Health & Science University 2012-08-09 [Tiling Array] Human 32k tiling BAC array (GPL15909) genomic Bunopithecus hoolock leuconedys,Homo sapiens
Bunopithecus hoolock leuconedys,Homo sapiens		 unclassified source_name:Hoolock_sorted chromosomes Human reference DNA title:Hoolock_poolB description:HLE_PoolB
15 GSM983887 Hoolock_poolC 33,680 Oregon Health & Science University 2012-08-09 [Tiling Array] Human 32k tiling BAC array (GPL15909) genomic Bunopithecus hoolock leuconedys,Homo sapiens
Bunopithecus hoolock leuconedys,Homo sapiens		 unclassified source_name:Hoolock_sorted chromosomes Human reference DNA title:Hoolock_poolC description:HLE_PoolC
16 GSM983888 Hoolock_poolD 33,680 Oregon Health & Science University 2012-08-09 [Tiling Array] Human 32k tiling BAC array (GPL15909) genomic Bunopithecus hoolock leuconedys,Homo sapiens
Bunopithecus hoolock leuconedys,Homo sapiens		 unclassified source_name:Hoolock_sorted chromosomes Human reference DNA title:Hoolock_poolD description:HLE_PoolD
17 GSM983889 Hoolock_poolE 33,680 Oregon Health & Science University 2012-08-09 [Tiling Array] Human 32k tiling BAC array (GPL15909) genomic Bunopithecus hoolock leuconedys,Homo sapiens
Bunopithecus hoolock leuconedys,Homo sapiens		 unclassified source_name:Hoolock_sorted chromosomes Human reference DNA title:Hoolock_poolE description:HLE_PoolE
18 GSM512646 BJAB replicate 1 13,746 UCSF 2010-02-22 [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) RNA Homo sapiens,unidentified
Homo sapiens,unidentified		 vein BJAB cells Common reference: mix of several different cell types (BJAB, BCBL, SLK, HFF, HUVEC, TIME), both infected and uninfected.
19 GSM512647 BJAB replicate 2 13,746 UCSF 2010-02-22 [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) RNA Homo sapiens,unidentified
Homo sapiens,unidentified		 vein BJAB cells Common reference: mix of several different cell types (BJAB, BCBL, SLK, HFF, HUVEC, TIME), both infected and uninfected.
20 GSM512648 BCBL-1 replicate 1 13,746 UCSF 2010-02-22 [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) RNA Homo sapiens,Human herpesvirus 8,unidentified
Homo sapiens,Human herpesvirus 8,unidentified		 pooled BCBL-1 cells stably infected with KSHV Common reference: mix of several different cell types (BJAB, BCBL, SLK, HFF, HUVEC, TIME), both infected and uninfected.
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