Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(109)
  Primates
(0)
  Rodents
(35)
  Mammals
(5)
  Vertebrates
(2)
  Invertebrates
(30)
  Plants
(45)
  Bacteria
(55)
  Viruses
(3)
  Phages
(0)
  Unclassified
(11)
  All
(296)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(3)
  Oligo Array
(8)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(11)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL6898 UC multi-primate Nimblegen microarray 388K 388,678 University of Chicago 2008-05-26 Nimblegen Macaca mulatta,Pan troglodytes,Homo sapiens
Macaca mulatta,Pan troglodytes,Homo sapiens
Oligo Array spotted oligonucleotide, UC multi-primate Nimblegen microarray 388K,
2 GPL6680 BC Cancer Agency_E.coli_H.influenzae_P.aeruginosa_HumanChr6_340K array v1 339,153 BC Cancer Agency 2008-04-03 NimbleGen Systems, Inc. Pseudomonas aeruginosa,Escherichia coli,Haemophilus influenzae,Homo sapiens
Pseudomonas aeruginosa,Escherichia coli,Haemophilus influenzae,Homo sapiens
Oligo Array spotted oligonucleotide, BC Cancer Agency_E.coli_H.influenzae_P.aeruginosa_HumanChr6_340K array v1,
3 GPL6762 Print_1046 42,624 Whitehead Institute for Biomedical Research 2008-04-22 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
cDNA Array spotted DNA/cDNA, Print_1046,
4 GPL6764 Print_1256 42,624 Whitehead Institute for Biomedical Research 2008-04-22 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
cDNA Array spotted DNA/cDNA, Print_1256,
5 GPL6763 Print_1110 41,088 Whitehead Institute for Biomedical Research 2008-04-22 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
cDNA Array spotted DNA/cDNA, Print_1110,
6 GPL6953 UCD_Ronald_XOarray_5K_V2.0 10,080 University of California, Davis 2008-06-11 ArrayCore Microarray Facility at University of California, Davis unidentified,Xanthomonas oryzae pv. oryzicola BLS256
unidentified,Xanthomonas oryzae pv. oryzicola BLS256
Oligo Array spotted oligonucleotide, UCD_Ronald_XOarray_5K_V2.0,
7 GPL6844 FHCRC miRNA Array v1.8.1 3,052 Fred Hutchinson Cancer Research Center 2008-05-07 FHCRC Genomics Resource Physcomitrella patens,Populus trichocarpa,Arabidopsis thaliana,Glycine max,Medicago truncatula,Oryza sativa,Saccharum officinarum,Sorghum bicolor,Zea mays,Caenorhabditis briggsae,Caenorhabditis elegans,Bombyx mori,Anopheles gambiae,Drosophila melanogaster
Physcomitrella patens,Populus trichocarpa,Arabidopsis thaliana,Glycine max,Medicago truncatula,Oryza sativa,Saccharum officinarum,Sorghum bicolor,Zea mays,Caenorhabditis briggsae,Caenorhabditis elegans,Bombyx mori,Anopheles gambiae,Drosophila melanogaster
Oligo Array spotted oligonucleotide, FHCRC miRNA Array v1.8.1, The array contains microRNA probes for multiple organisms annotated in the miRBase database (Release 8.1).
8 GPL6683 Duke MicroRNA microarray 1,618 Duke University 2008-04-04 Duke microarray facility Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus
Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus
Oligo Array spotted oligonucleotide, Duke MicroRNA microarray,
9 GPL6773 CCDTM miRNA700-V3 1,456 Sidra Medical and Research Center 2008-04-23 NIH Clinical Center, Dept. of Transfusion Medicine, Immunogenetics Section (NIH/CC/DTM) Homo sapiens,Mus musculus,Rattus norvegicus,Human herpesvirus 4,Simian virus 40,Human herpesvirus 8
Homo sapiens,Mus musculus,Rattus norvegicus,Human herpesvirus 4,Simian virus 40,Human herpesvirus 8
Oligo Array spotted oligonucleotide, CCDTM miRNA700-V3, This is a full representation of the condensed array in Platform GPL8377.
10 GPL6690 miRNA_Array_1566V2_16UP 701 Asuragen 2008-04-04 GE Healthcare Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus
Oligo Array in situ oligonucleotide, miRNA_Array_1566V2_16UP,
11 GPL6741 University of Minnesota multi-species miRNA 480 480 University of Minnesota 2008-04-14 Biomedical Genomics Center Microarray Facility at the University of Minnesota Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus
Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus
Oligo Array spotted oligonucleotide, University of Minnesota multi-species miRNA 480,