Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(810)
  Primates
(6)
  Rodents
(476)
  Mammals
(46)
  Vertebrates
(47)
  Invertebrates
(302)
  Plants
(266)
  Bacteria
(117)
  Viruses
(1)
  Phages
(0)
  Unclassified
(8)
  All
(2,081)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(5)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(3)
  Other
(0)
  All
(8)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Therapeutics of Ebola hemorrhagic fever: Whole-genome transcriptional analysis of successful disease mitigation (GSE24943) [Oligo Array] SFGF HEEBO Human Set v1.00 with custom orthopox oligos (GPL9700) Boston University School of Medicine 2010-10-26 Macaca mulatta,Homo sapiens
Macaca mulatta,Homo sapiens
4,350,346
(47,806 x 91)
91 by_platform
by_series
2 Microorganisms with novel dissimilatory (bi)sulfite reductase genes are widespread and part of the core microbiota in low-sulfate peatlands. (GSE24582) [Oligo Array] Habitat specific dsrAB targeted functional gene microarray (GPL11018) University of Vienna 2010-10-07 environmental samples,prokaryotic environmental samples
environmental samples,prokaryotic environmental samples
12,948
(156 x 83)
83 by_platform
by_series
3 Host intelligence in response to bacteriophage c2 infection in Lactococcus lactis IL1403 (GSE26042) [Oligo Array] TFRC IL1403-c2 2.5K v1.0 (GPL11277) Teagasc Food Research Centre 2010-12-14 Lactococcus lactis,Lactococcus phage c2
Lactococcus lactis,Lactococcus phage c2
4,588
(2,294 x 2)
2 by_platform
by_series
4 Differences in major bacterial taxa in three high Arctic soils lead to different CO2 production rates (GSE24800) [Oligo Array] NRC-BRI_16S rRNA PsychroChip_528 (GPL8953) NRC-BRI 2010-10-19 environmental samples,prokaryotic environmental samples
environmental samples,prokaryotic environmental samples
3,200
(160 x 20)
20 by_platform
by_series
5 Microbial community composition in sediments resists perturbation by nutrient enrichment (GSE25227) [Oligo Array] Princeton Biocomplexity Project, BC010 array, Salt marsh fertilization experiment (GPL11185) University of Massachusetts Boston 2010-11-09 Bacteria,unidentified
Bacteria,unidentified
1,872
(39 x 48)
48 by_platform
by_series
6 High-throughput 16S rRNA amplicon pyrosequencing of contaminated aquifer sediment (GSE25345) [HT Sequencing] 454 GS FLX (unidentified) (GPL11212) Helmholtz-Centre Munich 2010-11-15 unidentified
unidentified
15
(0 x 15)
15 by_platform
by_series
7 Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil contaminated aquifer by Pyro-SIP (GSE25449) [HT Sequencing] 454 GS FLX (unidentified) (GPL11212) Helmholtz-Centre Munich 2010-11-17 unidentified
unidentified
2
(0 x 2)
2 by_platform
by_series
8 Identification of Novel and Conserved MicroRNAs of Root-knot Nematode Using a Deep-sequencing Approach (GSE24833) [HT Sequencing] Illumina Genome Analyzer (Capsicum annuum; Meloidogyne incognita) (GPL11112) Hunan Agricultural University 2010-10-20 Capsicum annuum,Meloidogyne incognita
Capsicum annuum,Meloidogyne incognita
1
(0 x 1)
1 by_platform
by_series