Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(23)
  Tiling Array
(11)
  cDNA Array
(71)
  Oligo Array
(177)
  Bead Array
(4)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(122)
  Other
(23)
  All
(433)
 
1   |   2   |   3   |   4   |   5      »      [22]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression analysis in anaerobic Hanford 100H aquifer flow-through columns receiving lactate and chromate (GSE56554) [Oligo Array] Functional gene array for anaerobic Hanford 100H aquifer community (GPL18536) LBNL 2014-04-07 unidentified
unidentified
89,902
(44,951 x 2)
2 by_platform
by_series
2 Comparison of Transcriptome Profiles of Human Ehrlichiosis Agents (GSE56339) [HT Sequencing] Illumina HiSeq 2000 (Ehrlichia chaffeensis str. Saint Vincent) (GPL18512) University of Maryland School of Medicine 2014-03-28 Ehrlichia chaffeensis,unidentified
Ehrlichia chaffeensis,unidentified
12
(0 x 12)
12 by_platform
by_series
3 Genome-wide gene expression analysis of Fusarium graminearum isolate PH-1 in spores and mycelium (GSE55477) [HT Sequencing] Illumina HiSeq 2000 (Fusarium graminearum PH-1) (GPL18357) Wageningen university 2014-02-28 Fusarium,unidentified
Fusarium,unidentified
6
(0 x 6)
3 3 by_platform
by_series
4 Widespread Use of Non-Productive Alternative Splice Sites in Saccharomyces cerevisiae (GSE55213) [HT Sequencing] Illumina Genome Analyzer IIx (Saccharomyces cerevisiae BY4741) (GPL17253) University of California, Los Angeles 2014-02-20 Saccharomyces,unidentified
Saccharomyces,unidentified
4
(0 x 4)
4 by_platform
by_series
5 Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza development (GSE54789) [HT Sequencing] Illumina Genome Analyzer IIx (mixed sample) (GPL18264) INRA 2014-02-07 unidentified
unidentified
3
(0 x 3)
3 by_platform
by_series
6 Discovery of novel functional microRNAs generated from a cytoplasmic RNA virus by small RNA deep sequencing (GSE54368) [HT Sequencing] Illumina HiSeq 2000 (Hepatitis A virus; Homo sapiens) (GPL18215) Institute of Medical Biology 2014-01-23 Homo sapiens,Hepatitis A virus
Homo sapiens,Hepatitis A virus
1
(0 x 1)
1 by_platform
by_series
7 Comparative total RNA and mRNA sequencing and systems analysis reveals nascent transcriptional response to early HIV-1 infection in a CD4+ T cell line (GSE53993) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens; Human immunodeficiency virus 1) (GPL18160) University of Washington 2014-01-10 unidentified
unidentified
6
(0 x 6)
6 by_platform
by_series
8 Transcriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum (GSE53967) [Oligo Array] Agilent-020623 Dinoroseobacter shibae DFL 12 15k Oligo Microarray (Feature Number version) (GPL11243) Helmholtz-Centre for Infection Research 2014-01-09 unidentified
unidentified
31,488
(15,744 x 2)
2 by_platform
by_series
9 Transcriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum (GSE53967) [HT Sequencing] Illumina Genome Analyzer IIx (Dinoroseobacter shibae DFL 12) (GPL18143) Helmholtz-Centre for Infection Research 2014-01-09 unidentified
unidentified
2
(0 x 2)
2 by_platform
by_series
10 Transcriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum [RNA-seq] (GSE53871) [HT Sequencing] Illumina Genome Analyzer IIx (Dinoroseobacter shibae DFL 12) (GPL18143) Helmholtz-Centre for Infection Research 2014-01-07 unidentified
unidentified
2
(0 x 2)
2 by_platform
by_series
11 Light-dark changes in the transcriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum (GSE53846) [Oligo Array] Agilent-020623 Dinoroseobacter shibae DFL 12 15k Oligo Microarray (Feature Number version) (GPL11243) Helmholtz-Centre for Infection Research 2014-01-06 unidentified
unidentified
31,488
(15,744 x 2)
2 by_platform
by_series
12 Comparative transcriptional analysis of Desulfovibrio alaskensis G20 grown under various syntrophic and fermentative conditions on pyruvate relative to respiratory growth (GSE53226) [Oligo Array] NimbleGen Custom Desulfovibrio alaskensis str. G20 4-plex [080626_Ddes_G20_EXP] (GPL16334) Lawrence Berkeley National Laboratory 2013-12-11 Desulfovibrio,unidentified
Desulfovibrio,unidentified
58,368
(3,648 x 16)
16 by_platform
by_series
13 House Dust Mediates Gut Microbiome Lactobacillus johnsonii Enrichment and Immune Defense Against Airway Allergens [Set1] (GSE52906) [GeneChip] [PhyloChip] Affymetrix G2 PhyloChip (Nov2013v) (GPL18000) UCSF 2013-12-03 unidentified,metagenomes
unidentified,metagenomes
153,706
(10,979 x 14)
14 by_platform
by_series
14 MicroRNA analysis of breast cancer cell lines (GSE52802) [cDNA Array] miRXplore TM Microarray (968) (GPL17603) Tulane University 2013-11-27 synthetic construct,Homo sapiens
synthetic construct,Homo sapiens
6,428
(1,607 x 4)
4 by_platform
by_series
15 Gene expression profiling to identify genes that are differentially expressed between murine MHCIIlo and MHCIIhi dendritic cell subpopulations [MHCIIhi vs. MHCIIlo] (GSE52771) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Genentech, Inc. 2013-11-26 Mus musculus,Homo sapiens
Mus musculus,Homo sapiens
330,224
(41,278 x 8)
8 by_platform
by_series
16 Transcriptional adaptation of L. monocytogenes EGD to oxygen availability (GSE52325) [Oligo Array] L. monocytogenes EGDe array (GPL17774) Technical University Munich 2013-11-13 Listeria,unidentified
Listeria,unidentified
35,436
(2,953 x 12)
12 by_platform
by_series
17 High-resolution “tiling” expression data for Zymomonas mobilis ZM4 (GSE51870) [Tiling Array] 091006_AD_ZM4_2_1M_exp_HX1 (GPL17859) Lawrence Berkeley Lab 2013-10-29 Zymomonas mobilis subsp. mobilis,unidentified
Zymomonas mobilis subsp. mobilis,unidentified
9,352,215
(1,870,443 x 5)
5 by_platform
by_series
18 CNV in sexual and apomictic Boechera (GSE51596) [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) IPK Gatersleben 2013-10-23 Boechera polyantha,unidentified
Boechera polyantha,unidentified
28,773,800
(719,345 x 40)
40 by_platform
by_series
19 Highly efficient methane biocatalysis revealed in a methanotrophic bacterium (GSE51145) [HT Sequencing] Illumina HiSeq 2000 (Methylomicrobium alcaliphilum 20Z) (GPL17763) University of Washington 2013-09-24 Methylomicrobium,unidentified
Methylomicrobium,unidentified
8
(0 x 8)
8 by_platform
by_series
20 Penicillium marneffei: Gene expression profiling of hyphal and yeast cells and during conidiation (GSE51109) [cDNA Array] Pm 5K Random Array I (GPL17756) University of Melbourne 2013-09-23 Talaromyces,unidentified
Talaromyces,unidentified
16,128
(5,376 x 3)
2 1 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [22]