Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(756)
  Primates
(5)
  Rodents
(391)
  Mammals
(31)
  Vertebrates
(52)
  Invertebrates
(187)
  Plants
(210)
  Bacteria
(89)
  Viruses
(1)
  Phages
(0)
  Unclassified
(13)
  All
(1,736)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(1)
  cDNA Array
(3)
  Oligo Array
(2)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(7)
  Other
(0)
  All
(13)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 DEVELOPMENTAL MicroRNA EXPRESSION PROFILING OF MURINE NEURAL TUBE (GSE20879) [cDNA Array] Miltenyi Biotec miRXplore miRNA Microarray (717) (GPL10178) University of Louisville 2010-03-15 Mus musculus,unidentified
Mus musculus,unidentified
62,208
(6,912 x 9)
9 by_platform
by_series
2 DEVELOPMENTAL MicroRNA EXPRESSION PROFILING OF MURINE EMBRYONIC OROFACIAL TISSUE (GSE20880) [cDNA Array] Miltenyi Biotec miRXplore miRNA Microarray (653) (GPL10179) University of Louisville 2010-03-15 Mus musculus,unidentified
Mus musculus,unidentified
57,024
(6,336 x 9)
9 by_platform
by_series
3 RNA-Seq on libraries made from ERCC external RNA controls, and a mixture of D. melanogaster S2 cell mRNA and ERCC mRNAs (GSE20579) [HT Sequencing] Illumina Genome Analyzer II (Drosophila melanogaster; synthetic construct) (GPL10119) NIDDK, NIH 2010-03-01 Drosophila melanogaster,synthetic construct
Drosophila melanogaster,synthetic construct
3
(0 x 3)
3 by_platform
by_series
4 RNA-Seq on libraries made from serial dilutions of Drosophila melanogaster S2 cell mRNA and ERCC external RNA controls (GSE20555) [HT Sequencing] Illumina Genome Analyzer II (Drosophila melanogaster; synthetic construct) (GPL10119) NIDDK, NIH 2010-02-27 Drosophila melanogaster,synthetic construct
Drosophila melanogaster,synthetic construct
7
(0 x 7)
7 by_platform
by_series
5 Meta-transcriptomic analysis of the response of river biofilms to pharmaceutical products using anonymous DNA microarray (GSE20501) [cDNA Array] NRC-BRI biofilms 10K v1.0 (GPL10021) NRC-BRI 2010-02-23 environmental samples,prokaryotic environmental samples
environmental samples,prokaryotic environmental samples
604,800
(20,160 x 30)
30 by_platform
by_series
6 Mock or latently infected KSHV cells (BCBL, SLK and HFF) (GSE20443) [Tiling Array] KSHV tiling microarray AMADID: 017577 (GPL10083) UCSF 2010-02-22 Homo sapiens,unidentified
Homo sapiens,unidentified
164,952
(13,746 x 12)
10 2 by_platform
by_series
7 Accumulation of TuMV-derived siRNAs in aerial parts of Arabidopsis thaliana plants at 7 and 10 dpi (GSE20197) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana; Turnip mosaic virus) (GPL10065) Donald Danforth Plant Science Center 2010-02-04 Arabidopsis thaliana,Turnip mosaic virus
Arabidopsis thaliana,Turnip mosaic virus
36
(0 x 36)
36 by_platform
by_series
8 The functional potential of high Arctic permafrost (GSE20073) [Oligo Array] NRC-BRI_16S rRNA PsychroChip_528 (GPL8953) NRC-BRI 2010-01-27 environmental samples,prokaryotic environmental samples
environmental samples,prokaryotic environmental samples
1,600
(160 x 10)
10 by_platform
by_series
9 Virus-derived siRNAs in Arabidopsis thaliana (GSE19965) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana; Cucumber mosaic virus (strain FNY)) (GPL9951) UC Riverside 2010-01-20 unidentified
unidentified
6
(0 x 6)
6 by_platform
by_series
10 Molecular Basis of Infrared Detection by Snakes (GSE19911) [HT Sequencing] Illumina Genome Analyzer (Masticophis flagellum testaceus; Pantherophis obsoletus lindheimeri) (GPL9930) Carnegie Institution 2010-01-15 Pantherophis obsoletus lindheimeri,unidentified
Pantherophis obsoletus lindheimeri,unidentified
3
(0 x 3)
3 by_platform
by_series
11 miRNA profiling of miRNAs in Hibernating Arctic Ground Squirrels (GSE19808) [Oligo Array] Agilent-019119 Mouse miRNA Microarray 1.0 G4472A (GPL7732) CAS-MPG Partner Institute for Computational Biology 2010-01-08 unidentified
unidentified
47,232
(15,744 x 3)
1 2 by_platform
by_series
12 miRNA profiling by Illumina sequencing technology (GSE19807) [HT Sequencing] Illumina Genome Analyzer (Spermophilus parryii) (GPL9863) CAS-MPG Partner Institute for Computational Biology 2010-01-08 unidentified
unidentified
3
(0 x 3)
1 2 by_platform
by_series
13 miRNA profiling of miRNAs in Hibernating Arctic Ground Squirrels (GSE19808) [HT Sequencing] Illumina Genome Analyzer (Spermophilus parryii) (GPL9863) CAS-MPG Partner Institute for Computational Biology 2010-01-08 unidentified
unidentified
3
(0 x 3)
1 2 by_platform
by_series