Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,705)		   Primates
(37)		   Rodents
(1,748)		   Mammals
(295)		   Vertebrates
(402)		   Invertebrates
(1,004)		   Plants
(2,170)		   Bacteria
(1,636)		   Viruses
(78)		   Phages
(8)		   Unclassified
(399)		   All
(11,528)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(11)		   Tiling Array
(4)		   cDNA Array
(35)		   Oligo Array
(221)		   Bead Array
(2)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(4)		   HT-Seq
(91)		   Other
(29)		   All
(399)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL9957 miRCURY LNA microRNA Array, v. 9.2 - all organisms 2,242 MRC Cancer Cell Unit 2010-01-21 Exiqon A/S Homo sapiens,Human herpesvirus 1,Human herpesvirus 2,Human herpesvirus 5,Lymphocryptovirus,Rhadinovirus,BK polyomavirus,JC polyomavirus,Simian virus 40,Human immunodeficiency virus 1,Merkel cell polyomavirus
Homo sapiens,Human herpesvirus 1,Human herpesvirus 2,Human herpesvirus 5,Lymphocryptovirus,Rhadinovirus,BK polyomavirus,JC polyomavirus,Simian virus 40,Human immunodeficiency virus 1,Merkel cell polyomavirus		 Oligo Array spotted oligonucleotide, miRCURY LNA microRNA Array, v. 9.2 - all organisms, Platform data table annotations represent miRBase 13.0 and unique human microRNAs (miRPlus). LotNumberRange = 20434-20448
2 GPL9954 Mammalian miRNA Array V1.0 (CapitalBio, Beijing, China) 1,932 Tsinghua University 2010-01-21 CapitalBio Corporation Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, Mammalian miRNA Array V1.0 (CapitalBio, Beijing, China),
3 GPL9951 Illumina Genome Analyzer (Arabidopsis thaliana; Cucumber mosaic virus (strain FNY)) 0 2010-01-20 Arabidopsis thaliana,Cucumber mosaic virus (strain FNY)
Arabidopsis thaliana,Cucumber mosaic virus (strain FNY)		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer (Arabidopsis thaliana; Cucumber mosaic virus (strain FNY)),
4 GPL9908 miRCURY LNA microRNA Array, v.11.0 - hsa, mmu & rno [full array] 9,360 Hospital Nacional de Parapléjicos (SESCAM) 2010-01-14 Exiqon A/S Homo sapiens,Mus musculus,Rattus norvegicus,Human herpesvirus 1,Human herpesvirus 5,Murid herpesvirus 1,Human herpesvirus 4,BK polyomavirus,JC polyomavirus,Simian virus 40,Human immunodeficiency virus 1,Murid herpesvirus 4,Human herpesvirus 8
Homo sapiens,Mus musculus,Rattus norvegicus,Human herpesvirus 1,Human herpesvirus 5,Murid herpesvirus 1,Human herpesvirus 4,BK polyomavirus,JC polyomavirus,Simian virus 40,Human immunodeficiency virus 1,Murid herpesvirus 4,Human herpesvirus 8		 Oligo Array spotted oligonucleotide, miRCURY LNA microRNA Array, v.11.0 - hsa, mmu & rno [full array], Array covering Sanger miRBase 12.0 and Exiqon miRPlus mature miRNAs.
5 GPL9863 Illumina Genome Analyzer (Spermophilus parryii) 0 2010-01-08 unidentified
unidentified		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer (Spermophilus parryii),
6 GPL9838 NCode Multi-Species miRBase Microarray V2 1,141 Health Canada 2009-12-29 Invitrogen Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus
Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, NCode Multi-Species miRBase Microarray V2,
7 GPL9837 miRNA 3.7K microarray V3.0 3,696 peking university third hospital 2009-12-29 CapitalBio Corporation Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, miRNA 3.7K microarray V3.0,
8 GPL980 15 K cDNA 17,280 U.T. Southwestern Medical Center 2004-02-10 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 cDNA Array spotted DNA/cDNA, 15 K cDNA, Mouse and human 15,000 gene cDNA array
9 GPL9757 [stSmel_Mtra] SRL_SU Sinorhizobium meliloti/Medicago truncatula dual-genome SymbiosisChip, Affymetrix part number 510699 22,973 Stanford University 2009-12-07 Affymetrix Sinorhizobium meliloti,Medicago truncatula
Sinorhizobium meliloti,Medicago truncatula		 GeneChip in situ oligonucleotide, [stSmel_Mtra] SRL_SU Sinorhizobium meliloti/Medicago truncatula dual-genome SymbiosisChip, Affymetrix part number 510699, The dual genome Affymetrix SymbiosisChip contains probe sets for S. meliloti ORFs annotated in 2001, intergenic regions over 150 bp, and ~10,000 probe sets corresponding to expressed sequence tags of the plant host, Medicago truncatula.
10 GPL9735 Ambion 14K miRChip V1 14,215 Asuragen Inc. 2009-12-01 Affymetrix Homo sapiens,Mus musculus,Rattus norvegicus,synthetic construct
Homo sapiens,Mus musculus,Rattus norvegicus,synthetic construct		 GeneChip in situ oligonucleotide, Ambion 14K miRChip V1,
11 GPL9730 CSIR Fungi 20090901 96 v1.0 3,072 CSIR 2009-11-30 CSIR and ACGT Microarray Facility, University of Pretoria, Pretoria, South Africa Aspergillus,Eurotium amstelodami,Aspergillus clavatus,Aspergillus niger,Penicillium,Fusarium,Fusarium oxysporum,Fusarium sporotrichioides,Gibberella zeae,Alternaria alternata,Penicillium expansum,unidentified,Aspergillus carbonarius,Fusarium subglutinans,
Aspergillus,Eurotium amstelodami,Aspergillus clavatus,Aspergillus niger,Penicillium,Fusarium,Fusarium oxysporum,Fusarium sporotrichioides,Gibberella zeae,Alternaria alternata,Penicillium expansum,unidentified,Aspergillus carbonarius,Fusarium subglutinans,		 Oligo Array spotted oligonucleotide, CSIR Fungi 20090901 96 v1.0, Forty food-borne fungi
12 GPL9678 RUGMCB Pichia angusta 8x15K v1 13,032 University of Groningen 2009-11-16 Agilent Technologies unidentified
unidentified		 Oligo Array in situ oligonucleotide, RUGMCB Pichia angusta 8x15K v1,
13 GPL9674 Hebrew University of Jerusalem miRNA spotted array 1,584 The Hebrew University of Jerusalem 2009-11-15 Hebrew University of Jerusalem Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 Oligo Array spotted oligonucleotide, Hebrew University of Jerusalem miRNA spotted array,
14 GPL9517 Multi-species 1.1K miRNA array 1,147 University of Minnesota 2009-11-02 Biomedical Genomics Center Microarray Facility at the University of Minnesota Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus
Caenorhabditis elegans,Drosophila melanogaster,Danio rerio,Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, Multi-species 1.1K miRNA array,
15 GPL9472 Adelaide microarray facility Exiqon LNA miRNA microarray_version8.1 3,072 SA Pathology 2009-10-21 Adelaide Microarray Facility Arabidopsis thaliana,Saccharomyces cerevisiae,Caenorhabditis elegans,Drosophila melanogaster,Gallus gallus,Macaca mulatta,Homo sapiens,Bos taurus,Mus musculus,Rattus norvegicus
Arabidopsis thaliana,Saccharomyces cerevisiae,Caenorhabditis elegans,Drosophila melanogaster,Gallus gallus,Macaca mulatta,Homo sapiens,Bos taurus,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, Adelaide microarray facility Exiqon LNA miRNA microarray_version8.1, The actual (physical) array contains duplicate spots, 1487 x 2 + empty -> 3072 spots
16 GPL9462 MPIIB Exiqon Human/Mouse/Rat 16K mirCURY pre-release 1,600 Max-Planck-Institute for Infection Biology 2009-10-19 Exiqon A/S, Vedbaek, Denmark Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, MPIIB Exiqon Human/Mouse/Rat 16K mirCURY pre-release,
17 GPL9451 PICME Capsicum 10K 10,800 Austrian Research Centers GmbH - ARC 2009-10-15 AIT Austrian Institute of Technology Populus trichocarpa x Populus deltoides,Capsicum annuum,Solanum tuberosum,Ipomoea batatas,Triticum aestivum,Zea mays,Homo sapiens,Pinus pinaster,Populus euphratica,Populus tremula x Populus alba
Populus trichocarpa x Populus deltoides,Capsicum annuum,Solanum tuberosum,Ipomoea batatas,Triticum aestivum,Zea mays,Homo sapiens,Pinus pinaster,Populus euphratica,Populus tremula x Populus alba		 cDNA Array spotted DNA/cDNA, PICME Capsicum 10K, Support: Corning GAPS II; Coating: Gamma Amino Propyl Silane Number of spots: 10.800 Number of pins/blocks: 48 Spottdistance in µm: 220 Recurrances spots/slide: 2 Number of spots vertical: 15 Number of spots horinzontal: 15 Vertical offset of first block in µm: 2350 Horizontal offset of first block in µm: 3250
18 GPL9428 University of Chicago - HumanMouseDroCele tRNA array - 3200 - v1.0 3,200 University of Chicago 2009-10-12 Integrated Genomics, Inc. Caenorhabditis elegans,Drosophila melanogaster,Homo sapiens,Mus musculus
Caenorhabditis elegans,Drosophila melanogaster,Homo sapiens,Mus musculus		 Oligo Array spotted oligonucleotide, University of Chicago - HumanMouseDroCele tRNA array - 3200 - v1.0,
19 GPL9427 University of Chicago - HumanMouse tRNA array - 768 - v1.0 768 University of Chicago 2009-10-12 Pan lab, University of Chicago. Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 Oligo Array spotted oligonucleotide, University of Chicago - HumanMouse tRNA array - 768 - v1.0,
20 GPL9346 Campylobacter NCTC 11168 ORF-based array printed at IFR (second type) 5,322 Institute of Food Research 2009-10-03 Institute of Food Research, Norwich, UK unidentified
unidentified		 cDNA Array spotted DNA/cDNA, Campylobacter NCTC 11168 ORF-based array printed at IFR (second type), Corning barcoded GAPSII slides used
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