Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(903)
  Primates
(2)
  Rodents
(637)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(371)
  Bacteria
(0)
  Viruses
(4)
  Phages
(0)
  Unclassified
(23)
  All
(2,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(1)
  Tiling Array
(0)
  cDNA Array
(1)
  Oligo Array
(10)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(10)
  Other
(0)
  All
(23)
 
1   |   2      »      
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Gene expression based analysis of CroV infection of Cafeteria roenbergensis (GSE19051) [Oligo Array] Plymouth Marine Laboratory CroV Microarray Version 1 (GPL9687) Plymouth Marine Laboratory 2009-11-17 unidentified
unidentified
38,880
(4,320 x 9)
9 by_platform
by_series
2 Salmonella enterica serovar Typhimurium 4/74 transcriptomics using strand-specific RNA-seq (GSE49829) [HT Sequencing] Illumina HiSeq 2000 (Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74) (GPL17562) University of Liverpool 2013-08-13 unidentified
unidentified
34
(0 x 34)
34 by_platform
by_series
3 Small RNA profiling Tomato, wild tomato relative and series of introgression lines (GSE23562) [HT Sequencing] Illumina Genome Analyzer (Solanum lycopersicum x Solanum pennellii) (GPL10777) University of Cambridge 2010-08-11 Solanum lycopersicum,unidentified
Solanum lycopersicum,unidentified
14
(0 x 14)
14 by_platform
by_series
4 Differential expression of genes in the leaves of sugarcane in response to sugar accumulation (GSE11934) [GeneChip] [Sugar_Cane] Affymetrix Sugar Cane Genome Array (GPL3844) University of Oxford 2008-06-30 Saccharum sp.,unidentified
Saccharum sp.,unidentified
67,096
(8,387 x 8)
8 by_platform
by_series
5 Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly (GSE47680) [HT Sequencing] Illumina Genome Analyzer IIx (Saccharomyces cerevisiae BY4741) (GPL17253) University of Edinburgh 2013-06-05 Saccharomyces,unidentified
Saccharomyces,unidentified
4
(0 x 4)
4 by_platform
by_series
6 High-throughput identification of miRNA targets using CLASH (crosslinking, ligation and sequencing of hybrids) (GSE50452) [HT Sequencing] Illumina MiSeq (Homo sapiens; Saccharomyces cerevisiae) (GPL17658) University of Edinburgh 2013-08-29 Saccharomyces cerevisiae,Homo sapiens
Saccharomyces cerevisiae,Homo sapiens
2
(0 x 2)
2 by_platform
by_series
7 Structural and Functional Analysis of Viral siRNAs using Solexa sequencing (GSE17162) [HT Sequencing] Illumina Genome Analyzer (Cymbidium ringspot virus; Nicotiana benthamiana) (GPL10313) University of East Anglia 2009-07-17 Nicotiana benthamiana,Cymbidium ringspot virus
Nicotiana benthamiana,Cymbidium ringspot virus
4
(0 x 4)
4 by_platform
by_series
8 Structural and Functional Analysis of Viral siRNAs (GSE17278) [HT Sequencing] Illumina Genome Analyzer (Cymbidium ringspot virus; Nicotiana benthamiana) (GPL10313) University of East Anglia 2009-07-23 Nicotiana benthamiana,Cymbidium ringspot virus
Nicotiana benthamiana,Cymbidium ringspot virus
4
(0 x 4)
4 by_platform
by_series
9 Structural and Functional Analysis of Viral siRNAs using 454 sequencing (GSE17164) [HT Sequencing] 454 GS (Cymbidium ringspot virus; Nicotiana benthamiana) (GPL15026) University of East Anglia 2009-07-17 Nicotiana benthamiana,Cymbidium ringspot virus
Nicotiana benthamiana,Cymbidium ringspot virus
2
(0 x 2)
2 by_platform
by_series
10 Structural and Functional Analysis of Viral siRNAs (GSE17278) [HT Sequencing] 454 GS (Cymbidium ringspot virus; Nicotiana benthamiana) (GPL15026) University of East Anglia 2009-07-23 Nicotiana benthamiana,Cymbidium ringspot virus
Nicotiana benthamiana,Cymbidium ringspot virus
2
(0 x 2)
2 by_platform
by_series
11 Genotyping SAX1 Mouse Human Hybrid (GSE23816) [Bead Array] Illumina HumanHap550-Duov3 Genotyping BeadChip (HumanHap550-2v3_B) (GPL6982) The University of Edinburgh 2010-08-25 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
561,466
(561,466 x 1)
1 by_platform
by_series
12 Comparison of the nucleotide-resolution, genome-wide, 5'-end maps of the transcriptomes of Escherichia coli K12 strain BW25113 and Streptomyces coelicolor A3(2) strain M145 (GSE46507) [HT Sequencing] Illumina HiSeq 2000 (Escherichia coli BW25113) (GPL15206) University of Leeds 2013-04-30 Escherichia,unidentified
Escherichia,unidentified
2
(0 x 2)
2 by_platform
by_series
13 Role of putative RNA-binding proteins in Campylobacter jejuni gene expression and virulence (GSE35137) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-17 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
251,904
(15,744 x 16)
16 by_platform
by_series
14 Study of Cj1103 function in Campylobacter jejuni (GSE35121) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-16 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
173,184
(15,744 x 11)
11 by_platform
by_series
15 Study of Cj1501 function in Campylobacter jejuni (GSE35016) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-11 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
125,952
(15,744 x 8)
8 by_platform
by_series
16 Study of Cj0138 function in Campylobacter jejuni (GSE35119) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-16 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
62,976
(15,744 x 4)
4 by_platform
by_series
17 Study of Cj0667 function in Campylobacter jejuni (GSE35120) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-16 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
62,976
(15,744 x 4)
4 by_platform
by_series
18 Campylobacter jejuni exposure to 0.25mM GSNO (GSE7048) [cDNA Array] Campylobacter NCTC 11168 ORF-based array printed at IFR (third type) (GPL4869) Institute of Food Research 2007-02-16 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
46,064
(5,758 x 8)
8 by_platform
by_series
19 Do globins in the microaerophile Campylobacter jejuni function in nitrosative stress tolerance under oxygen limitation? (GSE38116) [Oligo Array] MWG Campylobacter jejuni Array (GPL532) University of Sheffield 2012-05-22 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
8,640
(1,728 x 5)
5 by_platform
by_series
20 Exposure of microaerobic Campylobacter jejuni to diffusible molecules from chicken caecal contents (GSE39917) [Oligo Array] MWG Campylobacter jejuni Array (GPL532) University of Sheffield 2012-08-06 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
8,640
(1,728 x 5)
5 by_platform
by_series
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