Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,705)		   Primates
(37)		   Rodents
(1,748)		   Mammals
(295)		   Vertebrates
(402)		   Invertebrates
(1,004)		   Plants
(2,170)		   Bacteria
(1,636)		   Viruses
(78)		   Phages
(8)		   Unclassified
(399)		   All
(11,528)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(11)		   Tiling Array
(4)		   cDNA Array
(35)		   Oligo Array
(221)		   Bead Array
(2)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(4)		   HT-Seq
(91)		   Other
(29)		   All
(399)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL13686 LC_MRA-1001C_miRHuman_12.0_080930 (miRNA ID version) 671 Yale University 2011-06-03 LC Sciences Danio rerio,Gallus gallus,Lemur catta,Ateles sp.,Gorilla gorilla,Pan troglodytes,Homo sapiens,Bos taurus,Mus musculus,Rattus norvegicus,Monodelphis domestica
Danio rerio,Gallus gallus,Lemur catta,Ateles sp.,Gorilla gorilla,Pan troglodytes,Homo sapiens,Bos taurus,Mus musculus,Rattus norvegicus,Monodelphis domestica		 Oligo Array in situ oligonucleotide, LC_MRA-1001C_miRHuman_12.0_080930 (miRNA ID version), LC Sciences Human miRNA Array Based on Sanger miRBase Release 12.0 miRHuman_12.0_YU_080930 Part No.: MRA-1001C
2 GPL16690 Yale Lu Human/Mouse microRNA v2.0 636 Yale University 2013-02-18 Lu Lab Homo sapiens,Mus musculus,Human herpesvirus 4
Homo sapiens,Mus musculus,Human herpesvirus 4		 Oligo Array spotted oligonucleotide, Yale Lu Human/Mouse microRNA v2.0, miRBase release version 19
3 GPL10565 Bead-based microRNA platform 0.435K 435 Yale University 2010-06-18 Golub Lab, Luminex Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 Oligo Array in situ oligonucleotide, Bead-based microRNA platform 0.435K,
4 GPL1447 Drosophila 200K high density 36mer oligo array 193,866 Yale 2004-09-14
Oligo Array spotted oligonucleotide, Drosophila 200K high density 36mer oligo array, synthesized oligonucleotide array on glass. This set includes 200,000 oligonucleotides, uniquely identified 36-mers. Keywords = high density oligonucleotide
5 GPL1714 Multi-species cDNA array 4,608 Yale 2004-11-19 Macaca mulatta,Pan troglodytes,Pongo pygmaeus,Homo sapiens
Macaca mulatta,Pan troglodytes,Pongo pygmaeus,Homo sapiens		 cDNA Array spotted DNA/cDNA, Multi-species cDNA array, Multi-species cDNA array
6 GPL6762 Print_1046 42,624 Whitehead Institute for Biomedical Research 2008-04-22 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus		 cDNA Array spotted DNA/cDNA, Print_1046,
7 GPL6764 Print_1256 42,624 Whitehead Institute for Biomedical Research 2008-04-22 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus		 cDNA Array spotted DNA/cDNA, Print_1256,
8 GPL6763 Print_1110 41,088 Whitehead Institute for Biomedical Research 2008-04-22 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus
Homo sapiens,Monkeypox virus,Vaccinia virus,Variola virus		 cDNA Array spotted DNA/cDNA, Print_1110,
9 GPL8843 Ambion Human Mouse Rat miRNA microarray (probes_1564V1_Oct05), condensed version 381 Wellcome Trust Centre for Human Genetics, University of Oxford 2009-07-13 Ambion Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, Ambion Human Mouse Rat miRNA microarray (probes_1564V1_Oct05), condensed version, condensed version of Ambion_probes_1564V1_Oct05
10 GPL3385 Hu/Mu ProtIn oligonucleotide microarray 1,253 Wayne State University 2006-01-24 Affymetrix Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 GeneChip in situ oligonucleotide, Hu/Mu ProtIn oligonucleotide microarray, Dual species array for profiling protease and protease inhibitor gene expression in tumors and their microenvironment.
11 GPL7791 Lovett/WUSTL_TFarray_v4 6,144 Washington University in St Louis 2008-12-12 Lovett Lab, WUSTL Gallus gallus,Homo sapiens,Mus musculus
Gallus gallus,Homo sapiens,Mus musculus		 Oligo Array spotted oligonucleotide, Lovett/WUSTL_TFarray_v4, The majority of probes interrogate transcription factors and are designed to coding regions.
12 GPL6648 Lovett/WUSTL 0.7k TFarray v3 4,800 Washington University in St Louis 2008-03-25 Lovett Lab, WUSTL Gallus gallus,Homo sapiens,Mus musculus
Gallus gallus,Homo sapiens,Mus musculus		 Oligo Array spotted oligonucleotide, Lovett/WUSTL 0.7k TFarray v3, The majority of probes interrogate transcription factors and are designed to coding regions.
13 GPL4384 Lovett_WUSTL_TFarray_v2 3,072 Washington University in St Louis 2006-10-03 Lovett Lab, WUSTL Gallus gallus,Homo sapiens,Mus musculus
Gallus gallus,Homo sapiens,Mus musculus		 Oligo Array spotted oligonucleotide, Lovett_WUSTL_TFarray_v2, The majority of probes interrogate transcription factors and are designed to coding regions.
14 GPL10388 Roche NimbleGen_Custom designed R. microplus_12x135K HD2 array 15,535 Washington State University 2010-05-05 NimbleGen Rhipicephalus microplus,Anaplasma marginale str. St. Maries
Rhipicephalus microplus,Anaplasma marginale str. St. Maries		 Oligo Array in situ oligonucleotide, Roche NimbleGen_Custom designed R. microplus_12x135K HD2 array, NimbleGen design name 090120_Amar_Bmic_RFMC, NimbleGen design ID 19181. A Roche NimbleGen high-density gene expression microarray custom designed for 14,447 genes based on the expressed sequence tag (EST) database, B. microplus Gene Index Version 2 (BmiGI V2) for R. microplus. Eight 60-mer probe per gene; each probe is replicated 1 time. The design includes random GC and other control probes.
15 GPL6429 Vanderbuilt University miRNA Bioarray 2,662 Vanderbilt University 2008-01-28 Ambion, Inc. Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, Vanderbuilt University miRNA Bioarray, Manufactured using GE Healthcare’s CodeLink (TM) 3-D Gel Matrix Technology Surface type: non-adsorptive Attachment: covalent The mirVana miRNA Bioarrays are an Ambion product that is manufactured by GE Healthcare and incorporates the CodeLink™ 3-D Gel Matrix slide surface. This aqueous environment elevates the probes away from the surface of the slide, allowing for maximum interaction between the probes and targets.
16 GPL16161 Agilent-020996 USEPA Ampelisca abdita 8 x15k 60mer v1.0 (G2509F) 7,351 US Environmental Protection Agency 2012-10-10 Agilent unidentified
unidentified		 Oligo Array in situ oligonucleotide, Agilent-020996 USEPA Ampelisca abdita 8 x15k 60mer v1.0 (G2509F),
17 GPL9173 Ambion mirVanaâ„¢ miRNA Probe Set 1564V2 Oct06_IZKF (condensed) 665 University of Wuerzburg 2009-09-10 Laboratory for microarray applications, IZKF, University of Wuerzburg Homo sapiens,Mus musculus,Rattus norvegicus
Homo sapiens,Mus musculus,Rattus norvegicus		 Oligo Array spotted oligonucleotide, Ambion mirVana™ miRNA Probe Set 1564V2 Oct06_IZKF (condensed), support = Nexterion® Slide E, coating = epoxy The Platform data table reflects a condensed representation of the array's quadruplicate features. The full array layout representing all of the individual features is linked as a supplementary file at the foot of this record.
18 GPL9108 UW CombiMatrix Candidatus Accumulibacter phosphatis 12.5K 12,544 University of Wisconsin-Madison 2009-08-26 CombiMatrix uncultured bacterium,Candidatus Accumulibacter phosphatis
uncultured bacterium,Candidatus Accumulibacter phosphatis		 Oligo Array in situ oligonucleotide, UW CombiMatrix Candidatus Accumulibacter phosphatis 12.5K,
19 GPL7022 Sugden Lab Epstein-Barr virus (EBV) miRNA microarray 39 University of Wisconsin-Madison 2008-07-05 Sugden Lab, University of Wisconsin-Madison Arabidopsis thaliana,Homo sapiens,Human herpesvirus 4
Arabidopsis thaliana,Homo sapiens,Human herpesvirus 4		 Oligo Array spotted oligonucleotide, Sugden Lab Epstein-Barr virus (EBV) miRNA microarray, The Platform data table reflects a condensed representation of the array's replicate features. The full array layout representing all of the individual features is linked as a supplementary file at the foot of this record.
20 GPL11674 UW/NimbleGen_humangorilla_custom_dupsdels 2,097,383 University of Washington 2011-01-31 Nimblegen Gorilla gorilla,Homo sapiens
Gorilla gorilla,Homo sapiens		 Oligo Array in situ oligonucleotide, UW/NimbleGen_humangorilla_custom_dupsdels,
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