Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(0)		   Primates
(0)		   Rodents
(8)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(69)		   Plants
(414)		   Bacteria
(0)		   Viruses
(0)		   Phages
(0)		   Unclassified
(51)		   All
(542)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(6)		   Tiling Array
(0)		   cDNA Array
(36)		   Oligo Array
(9)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(51)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(51)		   all
(51)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM668534 Mixed fermentation (yeast and Oenococcus oeni), day3, biological rep1 10,928 University of Stellenbosch 2011-02-04 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Oenococcus oeni,Saccharomyces cerevisiae Vin13
Oenococcus oeni,Saccharomyces cerevisiae Vin13		 unclassified source_name:Yeast Vin13 from a mixed fermentation including Oenococcus oeni (strain S6) at day 3 of fermentation title:Mixed fermentation (yeast and Oenococcus oeni), day3, biological rep1
2 GSM668535 Mixed fermentation (yeast and Oenococcus oeni), day3, biological rep2 10,928 University of Stellenbosch 2011-02-04 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Oenococcus oeni,Saccharomyces cerevisiae Vin13
Oenococcus oeni,Saccharomyces cerevisiae Vin13		 unclassified source_name:Yeast Vin13 from a mixed fermentation including Oenococcus oeni (strain S6) at day 3 of fermentation title:Mixed fermentation (yeast and Oenococcus oeni), day3, biological rep2
3 GSM668536 Mixed fermentation (yeast and Oenococcus oeni), day3, biological rep3 10,928 University of Stellenbosch 2011-02-04 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Oenococcus oeni,Saccharomyces cerevisiae Vin13
Oenococcus oeni,Saccharomyces cerevisiae Vin13		 unclassified source_name:Yeast Vin13 from a mixed fermentation including Oenococcus oeni (strain S6) at day 3 of fermentation title:Mixed fermentation (yeast and Oenococcus oeni), day3, biological rep3
4 GSM668537 Mixed fermentation (yeast and Oenococcus oeni), day7, biological rep1 10,928 University of Stellenbosch 2011-02-04 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Oenococcus oeni,Saccharomyces cerevisiae Vin13
Oenococcus oeni,Saccharomyces cerevisiae Vin13		 unclassified source_name:Yeast Vin13 from a mixed fermentation including Oenococcus oeni (strain S6) at day 7 of fermentation title:Mixed fermentation (yeast and Oenococcus oeni), day7, biological rep1
5 GSM668538 Mixed fermentation (yeast and Oenococcus oeni), day7, biological rep2 10,928 University of Stellenbosch 2011-02-04 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Oenococcus oeni,Saccharomyces cerevisiae Vin13
Oenococcus oeni,Saccharomyces cerevisiae Vin13		 unclassified source_name:Yeast Vin13 from a mixed fermentation including Oenococcus oeni (strain S6) at day 7 of fermentation title:Mixed fermentation (yeast and Oenococcus oeni), day7, biological rep2
6 GSM668539 Mixed fermentation (yeast and Oenococcus oeni), day7, biological rep3 10,928 University of Stellenbosch 2011-02-04 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Oenococcus oeni,Saccharomyces cerevisiae Vin13
Oenococcus oeni,Saccharomyces cerevisiae Vin13		 unclassified source_name:Yeast Vin13 from a mixed fermentation including Oenococcus oeni (strain S6) at day 7 of fermentation title:Mixed fermentation (yeast and Oenococcus oeni), day7, biological rep3
7 GSM339766 MeJA, 0h vs 12h, biol rep 1, tech rep 1 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 0 hpt MeJA-treated leaves, 12 hpt title:MeJA, 0h vs 12h, biol rep 1, tech rep 1 description:Biological replicate 1, technical replicate 1
8 GSM339767 MeJA, 12h vs 24h, biol rep 1, tech rep 1 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 12 hpt MeJA-treated leaves, 24 hpt title:MeJA, 12h vs 24h, biol rep 1, tech rep 1 description:Biological replicate 1, technical replicate 1
9 GSM339768 MeJA, 24h vs 48h, biol rep 1, tech rep 1 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 24 hpt MeJA-treated leaves, 48 hpt title:MeJA, 24h vs 48h, biol rep 1, tech rep 1 description:Biological replicate 1, technical replicate 1
10 GSM339769 MeJA, 48h vs Oh, biol rep 1, tech rep 1 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 48 hpt MeJA-treated leaves, 0 hpt title:MeJA, 48h vs Oh, biol rep 1, tech rep 1 description:Biological replicate 1, technical replicate 1
11 GSM339770 MeJA, 0h vs 12h, biol rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 0 hpt MeJA-treated leaves, 12 hpt title:MeJA, 0h vs 12h, biol rep 2 description:Biological replicate 2, technical replicate 1
12 GSM339771 MeJA, 12h vs 24h, biol rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 12 hpt MeJA-treated leaves, 24 hpt title:MeJA, 12h vs 24h, biol rep 2 description:Biological replicate 2, technical replicate 1
13 GSM339772 MeJA, 24h vs 48h, biol rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 24 hpt MeJA-treated leaves, 48 hpt title:MeJA, 24h vs 48h, biol rep 2 description:Biological replicate 2, technical replicate 1
14 GSM339773 MeJA, 48h vs Oh, biol rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 48 hpt MeJA-treated leaves, 0 hpt title:MeJA, 48h vs Oh, biol rep 2 description:Biological replicate 2, technical replicate 1
15 GSM339774 MeJA, 0h vs 12h, biol rep 1, tech rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 12 hpt MeJA-treated leaves, 0 hpt title:MeJA, 0h vs 12h, biol rep 1, tech rep 2 description:Biological replicate 1, technical replicate 2 (dye swap)
16 GSM339775 MeJA, 12h vs 24h, biol rep 1, tech rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 24 hpt MeJA-treated leaves, 12 hpt title:MeJA, 12h vs 24h, biol rep 1, tech rep 2 description:Biological replicate 1, technical replicate 2 (dye swap)
17 GSM339776 MeJA, 24h vs 48h, biol rep 1, tech rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 48 hpt MeJA-treated leaves, 24 hpt title:MeJA, 24h vs 48h, biol rep 1, tech rep 2 description:Biological replicate 1, technical replicate 2 (dye swap)
18 GSM339777 MeJA, 48h vs Oh, biol rep 1, tech rep 2 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:MeJA-treated leaves, 0 hpt MeJA-treated leaves, 48 hpt title:MeJA, 48h vs Oh, biol rep 1, tech rep 2 description:Biological replicate 1, technical replicate 2 (dye swap)
19 GSM339779 rust, 0h vs 20h, biol rep 1, tech rep 1 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:rust-treated leaves, 0 hpi rust-treated leaves, 20 hpi title:rust, 0h vs 20h, biol rep 1, tech rep 1 description:Biological replicate 1, technical replicate 1
20 GSM339780 rust, 20h vs 5d, biol rep 1, tech rep 1 4,224 CSIR Biosciences 2008-11-05 [cDNA Array] ACGT Pearl Millet SSH library 4K v1.0 (GPL7563) RNA Cenchrus,unidentified
Cenchrus,unidentified		 unclassified source_name:rust-treated leaves, 20 hpi rust-treated leaves, 5 dpi title:rust, 20h vs 5d, biol rep 1, tech rep 1 description:Biological replicate 1, technical replicate 1
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