Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(28,032)		   Primates
(191)		   Rodents
(8,356)		   Mammals
(1,530)		   Vertebrates
(561)		   Invertebrates
(895)		   Plants
(4,458)		   Bacteria
(2,513)		   Viruses
(10)		   Phages
(0)		   Unclassified
(167)		   All
(46,739)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(0)		   cDNA Array
(38)		   Oligo Array
(18)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(35)		   Other
(76)		   All
(167)		  
  brain
(4)		   blood
(23)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(11)		   lung
(1)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(3)		   unclassified
(125)		   all
(167)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM151950 OVA sensitized_UCP exposure_rep1 20,205 Helmholtz Zentrum München, German Research Center for Environmental Health 2006-12-20 [cDNA Array] GSF/IEG mouse 20K array version2 (GPL4636) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 lung Lung, OVA sensitized, UCP exposure Lung, OVA sensitized, particle free air
2 GSM530623 wild type_non-induced_rep1 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_wild type_non-induced title:wild type_non-induced_rep1 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under non-induced conditions. It is the first of three wild-type biological replicates used in this experiment, each from separate cultures.
3 GSM530624 wild type_non-induced_rep2 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_wild type_non-induced title:wild type_non-induced_rep2 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under non-induced conditions. It is the second of three wild-type biological replicates used in this experiment, each from separate cultures.
4 GSM530625 wild type_non-induced_rep3 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_wild type_non-induced title:wild type_non-induced_rep3 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under non-induced conditions. It is the third of three wild-type biological replicates used in this experiment, each from separate cultures.
5 GSM530626 wild type_virulence-induced_rep1 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_wild type_virulence-induced title:wild type_virulence-induced_rep1 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under virulence-induced conditions. It is the first of three wild-type biological replicates used in this experiment, each from separate cultures.
6 GSM530627 wild type_virulence-induced_rep2 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_wild type_virulence-induced title:wild type_virulence-induced_rep2 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under virulence-induced conditions. It is the second of three wild-type biological replicates used in this experiment, each from separate cultures.
7 GSM530628 wild type_virulence-induced_rep3 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_wild type_virulence-induced title:wild type_virulence-induced_rep3 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under virulence-induced conditions. It is the third of three wild-type biological replicates used in this experiment, each from separate cultures.
8 GSM530629 PC-deficient mutant_non-induced_rep1 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_PC-deficient mutant_non-induced title:PC-deficient mutant_non-induced_rep1 description:This sample is of Agrobacterium tumefaciens str. C58 DpmtA Dpcs mutant in which the PC-biosynthesis genes pmtA (ATU0300) and pcs (ATU1793) are deleted. The cells were grown under non-induced conditions. It is the first of three mutant biological replicates used in this experiment, each from separate cultures.
9 GSM530630 PC-deficient mutant_non-induced_rep2 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_PC-deficient mutant_non-induced title:PC-deficient mutant_non-induced_rep2 description:This sample is of Agrobacterium tumefaciens str. C58 DpmtA Dpcs mutant in which the PC-biosynthesis genes pmtA (ATU0300) and pcs (ATU1793) are deleted. The cells were grown under non-induced conditions. It is the second of three mutant biological replicates used in this experiment, each from separate cultures.
10 GSM530631 PC-deficient mutant_non-induced_rep3 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_PC-deficient mutant_non-induced title:PC-deficient mutant_non-induced_rep3 description:This sample is of Agrobacterium tumefaciens str. C58 DpmtA Dpcs mutant in which the PC-biosynthesis genes pmtA (ATU0300) and pcs (ATU1793) are deleted. The cells were grown under non-induced conditions. It is the third of three mutant biological replicates used in this experiment, each from separate cultures.
11 GSM530632 PC-deficient mutant_virulence-induced_rep1 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_PC-deficient mutant_virulence-induced title:PC-deficient mutant_virulence-induced_rep1 description:This sample is of Agrobacterium tumefaciens str. C58 DpmtA Dpcs mutant in which the PC-biosynthesis genes pmtA (ATU0300) and pcs (ATU1793) are deleted. The cells were grown under virulence-induced conditions. It is the first of three mutant biological replicates used in this experiment, each from separate cultures.
12 GSM530633 PC-deficient mutant_virulence-induced_rep2 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_PC-deficient mutant_virulence-induced title:PC-deficient mutant_virulence-induced_rep2 description:This sample is of Agrobacterium tumefaciens str. C58 DpmtA Dpcs mutant in which the PC-biosynthesis genes pmtA (ATU0300) and pcs (ATU1793) are deleted. The cells were grown under virulence-induced conditions. It is the second of three mutant biological replicates used in this experiment, each from separate cultures.
13 GSM530634 PC-deficient mutant_virulence-induced_rep3 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified		 unclassified source_name:A. tumefaciens_PC-deficient mutant_virulence-induced title:PC-deficient mutant_virulence-induced_rep3 description:This sample is of Agrobacterium tumefaciens str. C58 DpmtA Dpcs mutant in which the PC-biosynthesis genes pmtA (ATU0300) and pcs (ATU1793) are deleted. The cells were grown under virulence-induced conditions. It is the third of three mutant biological replicates used in this experiment, each from separate cultures.
14 GSM1100457 Immunoscreening C. jejuni 1, replicate 1 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (1 of 4) (GPL16810) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 1, replicate 1 description:slide415800 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
15 GSM1100458 Immunoscreening C. jejuni 1, replicate 2 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (1 of 4) (GPL16810) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 1, replicate 2 description:slide415964 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
16 GSM1100459 Immunoscreening C. jejuni 1, replicate 3 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (1 of 4) (GPL16810) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 1, replicate 3 description:slide415965 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
17 GSM1100460 Immunoscreening C. jejuni 2, replicate 1 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (2 of 4) (GPL16811) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 2, replicate 1 description:slide415799 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
18 GSM1100461 Immunoscreening C. jejuni 2, replicate 2 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (2 of 4) (GPL16811) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 2, replicate 2 description:slide416372 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
19 GSM1100462 Immunoscreening C. jejuni 2, replicate 3 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (2 of 4) (GPL16811) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 2, replicate 3 description:slide416373 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
20 GSM1100463 Immunoscreening C. jejuni 3, replicate 1 1,800 Fraunhofer Institute for Biomedical Engineering 2013-03-18 [Other] IBMT Campylobacter jejuni NCTC 11168 1.5k protein screening array (3 of 4) (GPL16812) protein Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 unclassified source_name:HaloTag-fusion proteins derived from Campylobacter jejuni cDNA and expressed in Acella E. coli overexpression strains title:Immunoscreening C. jejuni 3, replicate 1 description:slide416040 Recombinant protein (cDNA library). Crude lysate Acella E. coli + recombinantly expressed proteins.
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