Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(4,712)		   Primates
(41)		   Rodents
(1,963)		   Mammals
(85)		   Vertebrates
(71)		   Invertebrates
(162)		   Plants
(837)		   Bacteria
(313)		   Viruses
(0)		   Phages
(18)		   Unclassified
(320)		   All
(8,522)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(259)		   Tiling Array
(0)		   cDNA Array
(61)		   Oligo Array
(0)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(320)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(320)		   all
(320)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM49819 Animal pair 1 alcoholic 18,144 Thomas Jefferson University 2005-04-28 [cDNA Array] TJU-DBI Rat array v1 (GPL2000) RNA unidentified,Rattus norvegicus
unidentified,Rattus norvegicus		 unclassified source_name:Reference RNA Sample RNA title:Animal pair 1 alcoholic description:NTS punched from 250um slices and combined. RNA was isolated and amplified. Indirect labeling and hybridization at 37C overnight in a shaker at 50RPM.
2 GSM49820 Animal pair 1 control 18,144 Thomas Jefferson University 2005-04-28 [cDNA Array] TJU-DBI Rat array v1 (GPL2000) RNA unidentified,Rattus norvegicus
unidentified,Rattus norvegicus		 unclassified source_name:Reference RNA Sample RNA title:Animal pair 1 control description:NTS punched from 250um slices and combined. RNA was isolated and amplified. Indirect labeling and hybridization at 37C overnight in a shaker at 50RPM.
3 GSM49438 Chimp1VSRef 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp1VSRef description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee vs Reference characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
4 GSM49441 Chimp1VSRef34 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp1VSRef34 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee 1 vs Reference slide 34 characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
5 GSM49442 Chimp2VSRef27 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp2VSRef27 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee 2 vs Reference slide 27 characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
6 GSM49445 Chimp2VSRef40 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp2VSRef40 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee 2 vs Reference slide 40 characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
7 GSM49449 Chimp3VSRef49 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp3VSRef49 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee 3 vs Reference slide 49 characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
8 GSM49450 Chimp4VSRef37 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp4VSRef37 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee 4 vs Reference slide 37 characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
9 GSM49453 Chimp4VSRef59 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Chimp4VSRef59 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human label_ch2: CY5 Chimpanzee 4 vs Reference slide 59 characteristics_ch2: Chimp source_name_ch2: EXP source_name_ch1: REF
10 GSM49456 Orangutan1VSRef21 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan1VSRef21 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 1 vs Reference slide 21 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
11 GSM49458 Orangutan1VSRef39 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan1VSRef39 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 1 vs Reference slide 39 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
12 GSM49459 Orangutan2VSRef26 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan2VSRef26 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 2 vs Reference slide 26 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
13 GSM49462 Orangutan2VSRef35 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan2VSRef35 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 2 vs Reference slide 35 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
14 GSM49464 Orangutan3VSRef46 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan3VSRef46 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 3 vs Reference slide 46 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
15 GSM49466 Orangutan3VSRef58 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan3VSRef58 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 3 vs Reference slide 58 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
16 GSM49468 Orangutan4VSRef44 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan4VSRef44 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 4 vs Reference slide 44 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
17 GSM49469 Orangutan4VSRef45 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan4VSRef45 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 4 vs Reference slide 45 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
18 GSM49471 Orangutan5VSRef13 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan5VSRef13 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 5 vs Reference slide 13 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
19 GSM49472 Orangutan5VSRef33 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Pongo pygmaeus,Homo sapiens
Pongo pygmaeus,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Orangutan5VSRef33 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Orangutan 5 vs Reference slide 33 characteristics_ch2: orangutan source_name_ch2: EXP source_name_ch1: REF
20 GSM49475 Rhesus1VSRef17 4,608 Yale 2005-04-25 [cDNA Array] Multi-species cDNA array (GPL1714) RNA Macaca mulatta,Homo sapiens
Macaca mulatta,Homo sapiens		 unclassified source_name:polyA RNA total RNA title:Rhesus1VSRef17 description:data_processing: log base 2 ratio of cy5 to cy3 label_ch1: CY3 characteristics_ch1: human 6 label_ch2: CY5 Rhesus 1 vs Reference slide 17 characteristics_ch2: rhesus source_name_ch2: EXP source_name_ch1: REF
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