Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(15,996)		   Primates
(45)		   Rodents
(5,211)		   Mammals
(794)		   Vertebrates
(412)		   Invertebrates
(1,585)		   Plants
(2,134)		   Bacteria
(1,024)		   Viruses
(23)		   Phages
(0)		   Unclassified
(338)		   All
(27,759)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(4)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(328)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(3)		   Other
(3)		   All
(338)		  
  brain
(25)		   blood
(1)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(16)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(296)		   all
(338)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM362328 Tumor genes in the PDAC CAM model on day 1 (T1) 54,675 University Bordeaux 1 2009-01-22 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Gallus gallus,Homo sapiens
Gallus gallus,Homo sapiens		 pancreas Human pancreatic adenocarcinoma cells (BxPC3) grown on the chick-chorio-allantoic membrane for 1 day (T1)
2 GSM362337 Tumor genes in the PDAC CAM model on day 6 (T6) 54,675 University Bordeaux 1 2009-01-22 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Gallus gallus,Homo sapiens
Gallus gallus,Homo sapiens		 pancreas Human pancreatic adenocarcinoma cells (BxPC3) grown on the chick-chorio-allantoic membrane for 6 days (T6)
3 GSM362338 Stroma genes in the PDAC CAM model on day 1 (T1) 38,535 University Bordeaux 1 2009-01-22 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus,Homo sapiens
Gallus gallus,Homo sapiens		 pancreas CAM isolated at E11 one day after grafting of BxPC3 tumor cells (same RNA as GSM362328)
4 GSM362341 Stroma genes in the PDAC CAM model on day 6 (T6) 38,535 University Bordeaux 1 2009-01-22 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus,Homo sapiens
Gallus gallus,Homo sapiens		 pancreas CAM isolated at E16 six day after grafting of BxPC3 tumor cells (same RNA as GSM362337)
5 GSM363984 Control 4 33,012 ETH Zurich 2009-01-23 [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, empty vector transfected, cell clone 4
6 GSM363985 Control 9 33,012 ETH Zurich 2009-01-23 [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, empty vector transfected, cell clone 9
7 GSM363986 Control 25 33,012 ETH Zurich 2009-01-23 [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, empty vector transfected, cell clone 25
8 GSM363987 Podoplanin 6 33,012 ETH Zurich 2009-01-23 [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, human podoplanin transfected, cell clone 6
9 GSM363988 Podoplanin 11 33,012 ETH Zurich 2009-01-23 [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, human podoplanin transfected, cell clone 11
10 GSM363989 Podoplanin 14 33,012 ETH Zurich 2009-01-23 [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, human podoplanin transfected, cell clone 14
11 GSM363978 Control 4 32,878 ETH Zurich 2009-01-23 [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, empty vector transfected, cell clone 4
12 GSM363979 Control 9 32,878 ETH Zurich 2009-01-23 [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, empty vector transfected, cell clone 9
13 GSM363980 Control 25 32,878 ETH Zurich 2009-01-23 [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, empty vector transfected, cell clone 25
14 GSM363981 Podoplanin 6 32,878 ETH Zurich 2009-01-23 [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, human podoplanin transfected, cell clone 6
15 GSM363982 Podoplanin 11 32,878 ETH Zurich 2009-01-23 [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, human podoplanin transfected, cell clone 11
16 GSM363983 Podoplanin 14 32,878 ETH Zurich 2009-01-23 [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 breast MCF7 breast carcinoma xenograft, human podoplanin transfected, cell clone 14
17 GSM362569 Coded sample C_lyssavirus_LP chip 1,600 Veterinary Laboratories Agency 2009-01-22 [Oligo Array] AH/VLA Virus Detection Array LP1 1.6K (GPL8066) RNA unidentified
unidentified		 unclassified source_name:Water title:Coded sample C_lyssavirus_LP chip description:Detection of lyssaviruses in the coded samples
18 GSM362580 Control slide_LP chip 1,600 Veterinary Laboratories Agency 2009-01-22 [Oligo Array] AH/VLA Virus Detection Array LP1 1.6K (GPL8066) RNA unidentified
unidentified		 cerebrum Amplified RNA from mouse brain
19 GSM357050 mouse control cerebellum 1 1,146 University of Minnesota 2009-01-02 [Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021) mixed Mus musculus,Homo sapiens
Mus musculus,Homo sapiens		 cerebellum mouse cerebellum, control treated synthetic DNA oligos
20 GSM357051 mouse control cerebellum 2 1,146 University of Minnesota 2009-01-02 [Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021) mixed Mus musculus,Homo sapiens
Mus musculus,Homo sapiens		 cerebellum mouse cerebellum, control treated synthetic DNA oligos
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