Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(4)
  Tiling Array
(0)
  cDNA Array
(15)
  Oligo Array
(57)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(76)
 
  brain
(3)
  blood
(3)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(2)
  liver
(9)
  lung
(12)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(47)
  all
(76)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM400263 Human MSCs added to the NOD/scid mouse lung in vitro (U133 Plus 2.0) 54,675 Texas A&M 2009-05-05 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
lung In vitro mix of human MSCs and NOD/scid mouse lung
2 GSM400265 NOD/scid mouse lung 10 h after IV infusion of human MSCs (U133 Plus 2.0) 54,675 Texas A&M 2009-05-05 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
lung NOD/scid mouse lung 10 h after IV infusion of hMSCs
3 GSM400267 Human MSCs added to the NOD/scid mouse lung in vitro (430 2.0) 45,101 Texas A&M 2009-05-05 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
lung In vitro mix of human MSCs and NOD/scid mouse lung
4 GSM400268 NOD/scid mouse lung 10 h after IV infusion of human MSCs (430 2.0) 45,101 Texas A&M 2009-05-05 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
lung NOD/scid mouse lung 10 h after IV infusion of hMSCs
5 GSM406443 GPF_13285917_gacA_mutant_early_rep3 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:G4-gacA mutant P4-wt title:GPF_13285917_gacA_mutant_early_rep3 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
6 GSM406444 GPF_13285918_gacA_mutant_early_rep4 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:P4-wt G4-gacA mutant title:GPF_13285918_gacA_mutant_early_rep4 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
7 GSM406445 GPF_13285919_gacA_mutant_early_rep5 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:G5-gacA mutant P5-wt title:GPF_13285919_gacA_mutant_early_rep5 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
8 GSM406446 GPF_13285920_gacA_mutant_early_rep1 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:G3-gacA mutant P2-wt title:GPF_13285920_gacA_mutant_early_rep1 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
9 GSM406447 GPF_13285922_gacA_mutant_early_rep2 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:P2-wt G3-gacA mutant title:GPF_13285922_gacA_mutant_early_rep2 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
10 GSM406448 GPF_13285926_gacA_mutant_early_rep6 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:P5-wt G5-gacA mutant title:GPF_13285926_gacA_mutant_early_rep6 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
11 GSM406449 GPF_13285928_gacA_mutant_late_rep1 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:G2-gacA mutant P3-wt title:GPF_13285928_gacA_mutant_late_rep1 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
12 GSM406450 GPF_13285929_gacA_mutant_late_rep2 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:P3-wt G2-gacA mutant title:GPF_13285929_gacA_mutant_late_rep2 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
13 GSM406451 GPF_13285930_gacA_mutant_late_rep5 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:G5-gacA mutant P6-wt title:GPF_13285930_gacA_mutant_late_rep5 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
14 GSM406452 GPF_13285932_gacA_mutant_late_rep6 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:P6-wt G5-gacA mutant title:GPF_13285932_gacA_mutant_late_rep6 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
15 GSM406453 GPF_13285933_gacA_mutant_late_rep3 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:G3-gacA mutant P4-wt title:GPF_13285933_gacA_mutant_late_rep3 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
16 GSM406454 GPF_13285935_gacA_mutant_late_rep4 18,441 Macquarie University 2009-05-21 [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) RNA Pseudomonas,unidentified
Pseudomonas,unidentified
unclassified source_name:P4-wt G3-gacA mutant title:GPF_13285935_gacA_mutant_late_rep4 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
17 GSM392550 27h vs. 51h Sample_2821 2,381 Flanders Institute for Biotechnology (VIB) 2009-04-15 [Oligo Array] SBO_LAB_2k_version1 (GPL5459) RNA unidentified
unidentified
unclassified source_name:D12WW02T01at027h/1 D12WW02T01at051h/2 title:27h vs. 51h Sample_2821 description:RNA sampled during four 10-day spontaneous wheat sourdough fermentations with daily back-slopping carried out in the laboratory.
18 GSM392551 51h vs. 75h Sample_2822 2,381 Flanders Institute for Biotechnology (VIB) 2009-04-15 [Oligo Array] SBO_LAB_2k_version1 (GPL5459) RNA unidentified
unidentified
unclassified source_name:D12WW02T01at051h/2 D12WW02T01at075h/1 title:51h vs. 75h Sample_2822 description:RNA sampled during four 10-day spontaneous wheat sourdough fermentations with daily back-slopping carried out in the laboratory.
19 GSM392552 75h vs. 99h Sample_2823 2,381 Flanders Institute for Biotechnology (VIB) 2009-04-15 [Oligo Array] SBO_LAB_2k_version1 (GPL5459) RNA unidentified
unidentified
unclassified source_name:D12WW02T01at075h/1 D12WW02T01at099h/1 title:75h vs. 99h Sample_2823 description:RNA sampled during four 10-day spontaneous wheat sourdough fermentations with daily back-slopping carried out in the laboratory.
20 GSM392553 99h vs. 123h Sample_2824 2,381 Flanders Institute for Biotechnology (VIB) 2009-04-15 [Oligo Array] SBO_LAB_2k_version1 (GPL5459) RNA unidentified
unidentified
unclassified source_name:D12WW02T01at099h/1 D12WW02T01at123h/2 title:99h vs. 123h Sample_2824 description:RNA sampled during four 10-day spontaneous wheat sourdough fermentations with daily back-slopping carried out in the laboratory.
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