Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(5,267)		   Primates
(0)		   Rodents
(820)		   Mammals
(66)		   Vertebrates
(42)		   Invertebrates
(68)		   Plants
(854)		   Bacteria
(221)		   Viruses
(0)		   Phages
(0)		   Unclassified
(21)		   All
(7,359)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(17)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4)		   Other
(0)		   All
(21)		  
  brain
(0)		   blood
(2)		   connective
(7)		   reproductive
(0)		   muscular
(0)		   digestive
(8)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(4)		   all
(21)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1054593 Staphylococcus sp.OJ82 1% NaCl 0 Korea university 2012-12-18 [HT Sequencing] Illumina Genome Analyzer IIx (Staphylococcus sp. OJ82) (GPL16392) SRA Staphylococcus,unidentified
Staphylococcus,unidentified		 unclassified source_name:Staphylococcus sp.OJ82 1% NaCl title:Staphylococcus sp.OJ82 1% NaCl
2 GSM1054594 Staphylococcus sp.OJ82 11% NaCl 0 Korea university 2012-12-18 [HT Sequencing] Illumina Genome Analyzer IIx (Staphylococcus sp. OJ82) (GPL16392) SRA Staphylococcus,unidentified
Staphylococcus,unidentified		 unclassified source_name:Staphylococcus sp.OJ82 11% NaCl title:Staphylococcus sp.OJ82 11% NaCl
3 GSM940325 DR1-control 0 Korea university 2012-05-30 [HT Sequencing] Illumina Genome Analyzer IIx (Acinetobacter oleivorans) (GPL15630) SRA Acinetobacter,unidentified
Acinetobacter,unidentified		 unclassified source_name:stationary cells title:DR1-control description:control
4 GSM940326 DR1-nor4 0 Korea university 2012-05-30 [HT Sequencing] Illumina Genome Analyzer IIx (Acinetobacter oleivorans) (GPL15630) SRA Acinetobacter,unidentified
Acinetobacter,unidentified		 unclassified source_name:stationary cells title:DR1-nor4 description:treated with norfloxacin (4μg/ml) over a period of 15 min.
5 GSM923365 Salmonella_enterica_serovar_Typhimurium_UK1_5mM hydrogen peroxide_wild-type_rep1 4,504 Korea University 2012-04-27 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 wild-type
6 GSM923366 Salmonella_enterica_serovar_Typhimurium_UK1_5mM hydrogen peroxide_wild-type_rep2 4,504 Korea University 2012-04-27 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 wild-type
7 GSM923367 Salmonella_enterica_serovar_Typhimurium_UK1_delta_raoN_mutant_5mM hydrogen peroxide_wild-type_rep1 4,504 Korea University 2012-04-27 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 delta-raoN
8 GSM923368 Salmonella_enterica_serovar_Typhimurium_UK1_delta_raoN_mutant_5mM hydrogen peroxide_wild-type_rep2 4,504 Korea University 2012-04-27 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 delta-raoN
9 GSM852874 Salmonella_enterica_serovar_Typhimurium_UK1_0.3M NaCl_wild-type_rep1 4,504 Korea University 2011-12-22 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 wild-type
10 GSM852875 Salmonella_enterica_serovar_Typhimurium_UK1_0.3M NaCl_wild-type_rep2 4,504 Korea University 2011-12-22 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 wild-type
11 GSM852876 Salmonella_enterica_serovar_Typhimurium_UK1_0.3M NaCl_delta_iacP_mutant_rep1 4,504 Korea University 2011-12-22 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 wild-type delta-iacP
12 GSM852877 Salmonella_enterica_serovar_Typhimurium_UK1_0.3M NaCl_delta_iacP_mutant_rep2 4,504 Korea University 2011-12-22 [Oligo Array] Nimblegen Salmonella Typhimurium LT2 4.5K [081014_Styp_LT2_EXP] (GPL15054) RNA unidentified
unidentified		 intestine Salmonella enterica serovar Typhimurium UK1 wild-type delta-iacP
13 GSM424808 Macrophage_infected_rep1 1,202 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 peripheral blood Macrophage_infected_rep1
14 GSM424809 Macrophage_infected_rep2 1,202 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 peripheral blood Macrophage_infected_rep2
15 GSM424810 Fibroblast_infected_rep6 1,202 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 skin Fibroblast_infected_rep6
16 GSM424811 Fibroblast_infected_rep7 1,202 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 skin Fibroblast_infected_rep7
17 GSM424802 Fibroblast_infected_rep1 1,097 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 skin Fibroblast_infected_rep1
18 GSM424803 Fibroblast_infected_rep2 1,097 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 skin Fibroblast_infected_rep2
19 GSM424805 Fibroblast_infected_rep3 1,097 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 skin Fibroblast_infected_rep3
20 GSM424806 Fibroblast_infected_rep4 1,097 Seoul National Univ. College of Medicine 2009-07-06 [Oligo Array] Combimatrix Orientia tsutsugamushi customArray 4x2k (GPL8805) RNA Orientia tsutsugamushi,Mus musculus
Orientia tsutsugamushi,Mus musculus		 skin Fibroblast_infected_rep4
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