Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(17,356)

Invertebrates
(1,567)

Plants
(3,435)

Bacteria
(998)

Viruses
(14)

Phages
(0)

Unclassified
(76)

All
(33,004)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(4)

Tiling Array
(0)

cDNA Array
(15)

Oligo Array
(57)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(0)

Other
(0)

All
(76)

brain
(3)

blood
(3)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(2)

liver
(9)

lung
(12)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(0)

unclassified
(47)

all
(76)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM414381	Control replicate 1	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, control treated synthetic DNA
2	GSM414382	Control replicate 2	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, control treated synthetic DNA
3	GSM414383	Control replicate 3	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, control treated synthetic DNA
4	GSM414384	vinyl carbamate treated 1	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, vinyl carbamate treated synthetic DNA
5	GSM414385	vinyl carbamate treated 2	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, vinyl carbamate treated synthetic DNA
6	GSM414386	vinyl carbamate treated 3	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, vinyl carbamate treated synthetic DNA
7	GSM414387	vinyl carbamate treated 4	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, vinyl carbamate treated synthetic DNA
8	GSM414388	vinyl carbamate and indole-3-carbinol treated 1	1,146	University of Minnesota	2009-06-08	[Oligo Array] Biomedical Genomics Center Microarray Facility Custom Multi-Species miRNA Microarray (GPL8021)	mixed	Mus musculus,Homo sapiens	lung	Total RNA from lung tumor of mice, vinyl carbamate and indole-3-carbinol treated synthetic DNA
9	GSM406443	GPF_13285917_gacA_mutant_early_rep3	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:G4-gacA mutant P4-wt title:GPF_13285917_gacA_mutant_early_rep3 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
10	GSM406444	GPF_13285918_gacA_mutant_early_rep4	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:P4-wt G4-gacA mutant title:GPF_13285918_gacA_mutant_early_rep4 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
11	GSM406445	GPF_13285919_gacA_mutant_early_rep5	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:G5-gacA mutant P5-wt title:GPF_13285919_gacA_mutant_early_rep5 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
12	GSM406446	GPF_13285920_gacA_mutant_early_rep1	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:G3-gacA mutant P2-wt title:GPF_13285920_gacA_mutant_early_rep1 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
13	GSM406447	GPF_13285922_gacA_mutant_early_rep2	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:P2-wt G3-gacA mutant title:GPF_13285922_gacA_mutant_early_rep2 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
14	GSM406448	GPF_13285926_gacA_mutant_early_rep6	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:P5-wt G5-gacA mutant title:GPF_13285926_gacA_mutant_early_rep6 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
15	GSM406449	GPF_13285928_gacA_mutant_late_rep1	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:G2-gacA mutant P3-wt title:GPF_13285928_gacA_mutant_late_rep1 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
16	GSM406450	GPF_13285929_gacA_mutant_late_rep2	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:P3-wt G2-gacA mutant title:GPF_13285929_gacA_mutant_late_rep2 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
17	GSM406451	GPF_13285930_gacA_mutant_late_rep5	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:G5-gacA mutant P6-wt title:GPF_13285930_gacA_mutant_late_rep5 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
18	GSM406452	GPF_13285932_gacA_mutant_late_rep6	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:P6-wt G5-gacA mutant title:GPF_13285932_gacA_mutant_late_rep6 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
19	GSM406453	GPF_13285933_gacA_mutant_late_rep3	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:G3-gacA mutant P4-wt title:GPF_13285933_gacA_mutant_late_rep3 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.
20	GSM406454	GPF_13285935_gacA_mutant_late_rep4	18,441	Macquarie University	2009-05-21	[Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620)	RNA	Pseudomonas,unidentified	unclassified	source_name:P4-wt G3-gacA mutant title:GPF_13285935_gacA_mutant_late_rep4 description:This slide measures gene expression of a gacA mutant as compared to wild type. The gacA mutant of Pf-5 was constructed by replacing 626 bp internal to gacA with aphI, which confers kanamycin resistance.

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