Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(33,137)
  Primates
(196)
  Rodents
(10,648)
  Mammals
(1,806)
  Vertebrates
(771)
  Invertebrates
(1,113)
  Plants
(7,693)
  Bacteria
(2,917)
  Viruses
(10)
  Phages
(0)
  Unclassified
(511)
  All
(58,828)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8)
  Tiling Array
(0)
  cDNA Array
(38)
  Oligo Array
(348)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(41)
  Other
(76)
  All
(511)
 
  brain
(4)
  blood
(171)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(11)
  lung
(1)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3)
  unclassified
(321)
  all
(511)
 
1   |   2   |   3   |   4   |   5      »      [26]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM530628 wild type_virulence-induced_rep3 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified
unclassified source_name:A. tumefaciens_wild type_virulence-induced title:wild type_virulence-induced_rep3 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under virulence-induced conditions. It is the third of three wild-type biological replicates used in this experiment, each from separate cultures.
2 GSM530627 wild type_virulence-induced_rep2 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified
unclassified source_name:A. tumefaciens_wild type_virulence-induced title:wild type_virulence-induced_rep2 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under virulence-induced conditions. It is the second of three wild-type biological replicates used in this experiment, each from separate cultures.
3 GSM530626 wild type_virulence-induced_rep1 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified
unclassified source_name:A. tumefaciens_wild type_virulence-induced title:wild type_virulence-induced_rep1 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under virulence-induced conditions. It is the first of three wild-type biological replicates used in this experiment, each from separate cultures.
4 GSM530625 wild type_non-induced_rep3 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified
unclassified source_name:A. tumefaciens_wild type_non-induced title:wild type_non-induced_rep3 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under non-induced conditions. It is the third of three wild-type biological replicates used in this experiment, each from separate cultures.
5 GSM530624 wild type_non-induced_rep2 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified
unclassified source_name:A. tumefaciens_wild type_non-induced title:wild type_non-induced_rep2 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under non-induced conditions. It is the second of three wild-type biological replicates used in this experiment, each from separate cultures.
6 GSM530623 wild type_non-induced_rep1 5,344 Ruhr-Universität Bochum 2010-04-06 [Oligo Array] Ruhr-Universität Bochum/NimbleGen A_tumefaciens_C58_4x72K array (GPL10294) RNA unidentified
unidentified
unclassified source_name:A. tumefaciens_wild type_non-induced title:wild type_non-induced_rep1 description:This sample is of wild type Agrobacterium tumefaciens str. C58 grown under non-induced conditions. It is the first of three wild-type biological replicates used in this experiment, each from separate cultures.
7 GSM1023040 wild type under anaerobic conditions, biological replicate 2 7,775 University of Tübingen 2012-10-19 [GeneChip] [S_aureus] Affymetrix S. aureus Genome Array (GPL1339) RNA Staphylococcus aureus,unidentified
Staphylococcus aureus,unidentified
unclassified source_name:wildtype under anaerobic conditions in exponential growth phase title:wild type under anaerobic conditions, biological replicate 2 description:Gene expression data of aerobic S. aureus cultures in exponential phase of growth
8 GSM1023035 wild type under anaerobic conditions, biological replicate 1 7,775 University of Tübingen 2012-10-19 [GeneChip] [S_aureus] Affymetrix S. aureus Genome Array (GPL1339) RNA Staphylococcus aureus,unidentified
Staphylococcus aureus,unidentified
unclassified source_name:wildtype under anaerobic conditions in exponential growth phase title:wild type under anaerobic conditions, biological replicate 1 description:Gene expression data of aerobic S. aureus cultures in exponential phase of growth
9 GSM1023037 wild type under aerobic conditions, biological replicate 2 7,775 University of Tübingen 2012-10-19 [GeneChip] [S_aureus] Affymetrix S. aureus Genome Array (GPL1339) RNA Staphylococcus aureus,unidentified
Staphylococcus aureus,unidentified
unclassified source_name:wildtype under aerobic conditions in exponential growth phase title:wild type under aerobic conditions, biological replicate 2 description:Gene expression data of aerobic S. aureus cultures in exponential phase of growth
10 GSM1023033 wild type under aerobic conditions, biological replicate 1 7,775 University of Tübingen 2012-10-19 [GeneChip] [S_aureus] Affymetrix S. aureus Genome Array (GPL1339) RNA Staphylococcus aureus,unidentified
Staphylococcus aureus,unidentified
unclassified source_name:wildtype under aerobic conditions in exponential growth phase title:wild type under aerobic conditions, biological replicate 1 description:Gene expression data of aerobic S. aureus cultures in exponential phase of growth
11 GSM1363206 Sexual_Plant9-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera schistacea,unidentified
Boechera schistacea,unidentified
unclassified source_name:Sexual_Plant9_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant9-Cy5
12 GSM1363205 Sexual_Plant9-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera schistacea,unidentified
Boechera schistacea,unidentified
unclassified source_name:Sexual_Plant9_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant9-Cy3
13 GSM1363204 Sexual_Plant8-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera stricta,unidentified
Boechera stricta,unidentified
unclassified source_name:Sexual_Plant8_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant8-Cy5
14 GSM1363203 Sexual_Plant8-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera stricta,unidentified
Boechera stricta,unidentified
unclassified source_name:Sexual_Plant8_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant8-Cy3
15 GSM1363202 Sexual_Plant7-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera stricta,unidentified
Boechera stricta,unidentified
unclassified source_name:Sexual_Plant7_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant7-Cy5
16 GSM1363201 Sexual_Plant7-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera stricta,unidentified
Boechera stricta,unidentified
unclassified source_name:Sexual_Plant7_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant7-Cy3
17 GSM1363200 Sexual_Plant6-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera polyantha,unidentified
Boechera polyantha,unidentified
unclassified source_name:Sexual_Plant6_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant6-Cy5
18 GSM1363199 Sexual_Plant6-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera polyantha,unidentified
Boechera polyantha,unidentified
unclassified source_name:Sexual_Plant6_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant6-Cy3
19 GSM1363198 Sexual_Plant5-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera crandallii,unidentified
Boechera crandallii,unidentified
unclassified source_name:Sexual_Plant5_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant5-Cy5
20 GSM1363197 Sexual_Plant5-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera crandallii,unidentified
Boechera crandallii,unidentified
unclassified source_name:Sexual_Plant5_CGH pooled reference sample (mixture of different genotypes) title:Sexual_Plant5-Cy3
1   |   2   |   3   |   4   |   5      »      [26]