Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(283,034)		   Primates
(3,878)		   Rodents
(119,901)		   Mammals
(6,012)		   Vertebrates
(9,124)		   Invertebrates
(22,200)		   Plants
(46,194)		   Bacteria
(25,365)		   Viruses
(1,117)		   Phages
(42)		   Unclassified
(4,055)		   All
(522,119)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(392)		   Tiling Array
(44)		   cDNA Array
(766)		   Oligo Array
(1,592)		   Bead Array
(575)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(680)		   Other
(6)		   All
(4,055)		  
  brain
(138)		   blood
(356)		   connective
(193)		   reproductive
(7)		   muscular
(88)		   digestive
(515)		   liver
(137)		   lung
(64)		   urinary
(24)		   endo/exo-crine
(49)		   embryo
(9)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(6)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(338)		   unclassified
(2,131)		   all
(4,055)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM845292 Rana sierrae-Liver- control-late-rep1 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- control-late
2 GSM845293 Rana sierrae-Liver- infected-late-rep1 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- infected-late
3 GSM845296 Rana sierrae-Liver- infected-early-rep1 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- infected-early
4 GSM845298 Rana sierrae-Liver- control-early-rep1 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- control-early
5 GSM845299 Rana sierrae-Liver- control-early-rep2 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- control-early
6 GSM845300 Rana sierrae-Liver- infected-late-rep2 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- infected-late
7 GSM845303 Rana sierrae-Liver- infected-early-rep2 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- infected-early
8 GSM845306 Rana sierrae-Liver- control-early-rep3 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- control-early
9 GSM845308 Rana sierrae-Liver- infected-early-rep3 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- infected-early
10 GSM845309 Rana sierrae-Liver- control-late-rep2 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- control-late
11 GSM845312 Rana sierrae-Liver- control-late-rep3 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- control-late
12 GSM845315 Rana sierrae-Liver- infected-late-rep3 29,258 University of Idaho 2011-12-07 [Oligo Array] NimbleGen Rana muscosa/sierrae 12-plex Oligo Custom Expression Array [100211_RM_MS_EXP] (GPL14978) RNA Rana,unidentified
Rana,unidentified		 liver/hepato Rana sierrae-Liver- infected-late
13 GSM231087 Animal 1 hepatectomy sham surgery 1h 18,168 Thomas Jefferson University 2007-09-23 [cDNA Array] TJU-DBI Rat array v3.2 (GPL5051) RNA synthetic construct,Rattus norvegicus
synthetic construct,Rattus norvegicus		 liver/hepato To analyze the effects of surgical stress on gene expression levels in rat liver by performing sham surgery on the liver of rats and comparing the livers to reference RNA.
14 GSM231088 Animal 2 hepatectomy sham surgery 1h 18,168 Thomas Jefferson University 2007-09-23 [cDNA Array] TJU-DBI Rat array v3.2 (GPL5051) RNA synthetic construct,Rattus norvegicus
synthetic construct,Rattus norvegicus		 liver/hepato To analyze the effects of surgical stress on gene expression levels in rat liver by performing sham surgery on the liver of rats and comparing the livers to reference RNA.
15 GSM231089 Animal 3 hepatectomy sham surgery 1h 18,168 Thomas Jefferson University 2007-09-23 [cDNA Array] TJU-DBI Rat array v3.2 (GPL5051) RNA synthetic construct,Rattus norvegicus
synthetic construct,Rattus norvegicus		 liver/hepato To analyze the effects of surgical stress on gene expression levels in rat liver by performing sham surgery on the liver of rats and comparing the livers to reference RNA.
16 GSM231090 Animal 4 hepatectomy sham surgery 1h 18,168 Thomas Jefferson University 2007-09-23 [cDNA Array] TJU-DBI Rat array v3.2 (GPL5051) RNA synthetic construct,Rattus norvegicus
synthetic construct,Rattus norvegicus		 liver/hepato To analyze the effects of surgical stress on gene expression levels in rat liver by performing sham surgery on the liver of rats and comparing the livers to reference RNA.
17 GSM701965 PH 3 hours replicate rat #2 1,146 University of Minnesota 2011-04-05 [Oligo Array] Multispecies miRNA 1K (GPL9142) mixed Rattus norvegicus,Homo sapiens
Rattus norvegicus,Homo sapiens		 liver/hepato rat liver Reference DNA
18 GSM701966 PH 3 hours replicate rat #34 1,146 University of Minnesota 2011-04-05 [Oligo Array] Multispecies miRNA 1K (GPL9142) mixed Rattus norvegicus,Homo sapiens
Rattus norvegicus,Homo sapiens		 liver/hepato rat liver Reference DNA
19 GSM701967 PH 3 hours replicate rat #35 1,146 University of Minnesota 2011-04-05 [Oligo Array] Multispecies miRNA 1K (GPL9142) mixed Rattus norvegicus,Homo sapiens
Rattus norvegicus,Homo sapiens		 liver/hepato rat liver Reference DNA
20 GSM701968 PH 36 hours replicate rat #1 1,146 University of Minnesota 2011-04-05 [Oligo Array] Multispecies miRNA 1K (GPL9142) mixed Rattus norvegicus,Homo sapiens
Rattus norvegicus,Homo sapiens		 liver/hepato rat liver Reference DNA
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