Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(743)
  Primates
(5)
  Rodents
(386)
  Mammals
(31)
  Vertebrates
(51)
  Invertebrates
(187)
  Plants
(209)
  Bacteria
(89)
  Viruses
(1)
  Phages
(0)
  Unclassified
(12)
  All
(1,715)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(6)
  Tiling Array
(1)
  cDNA Array
(11)
  Oligo Array
(20)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(13)
  Other
(0)
  All
(51)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Transcriptome analysis of zebrafish mononuclear myogenic cells (zMNCs) during myogenic differentiation (GSE19754) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Children's Hospital Boston 2010-01-05 Danio rerio
Danio rerio
499,744
(15,617 x 32)
32 by_platform
by_series
2 Systematic identification of genes involved in embyonic chicken muscle development (GSE20990) [GeneChip] Affymetrix Chicken Genome Array [GgChicken_ENTREZG10] (GPL10234) Peking University 2010-03-22 Gallus gallus
Gallus gallus
299,880
(12,495 x 24)
24 by_platform
by_series
3 Systematic analysis of miRNA transcriptome of skeletal muscle identifies novel miRNAs and differentially expressed miRNAs in divergent skeletal muscle growth rates of broiler and layer chickens (GSE20992) [GeneChip] Affymetrix Chicken Genome Array [GgChicken_ENTREZG10] (GPL10234) Peking University 2010-03-22 Gallus gallus
Gallus gallus
299,880
(12,495 x 24)
24 by_platform
by_series
4 Massive decrease of maternal polyA mRNA upon post-ovulatory aging in Xenopus tropicalis (GSE21109) [GeneChip] [X_tropicalis] Affymetrix Xenopus tropicalis Genome Array (GPL10263) Institut fuer Zellbiologie 2010-03-29 Xenopus (Silurana) tropicalis
Xenopus tropicalis
236,084
(59,021 x 4)
4 by_platform
by_series
5 Expression data comparing wild-type and spt mutant zebrafish tissues at two developmental time points. (GSE19955) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Colorado State University 2010-01-20 Danio rerio
Danio rerio
171,787
(15,617 x 11)
11 by_platform
by_series
6 Detection of the up-regulated and down-regulated genes in stac mutant of zebrafish by cDNA microarray (GSE20707) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Tsinghua University 2010-03-09 Danio rerio
Danio rerio
124,936
(15,617 x 8)
8 by_platform
by_series