Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(28,971)
  Primates
(89)
  Rodents
(7,954)
  Mammals
(744)
  Vertebrates
(774)
  Invertebrates
(2,181)
  Plants
(2,767)
  Bacteria
(1,374)
  Viruses
(236)
  Phages
(0)
  Unclassified
(665)
  All
(45,839)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(38)
  Tiling Array
(25)
  cDNA Array
(68)
  Oligo Array
(614)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(28)
  Other
(0)
  All
(774)
 
  brain
(0)
  blood
(2)
  connective
(0)
  reproductive
(0)
  muscular
(1)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(22)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(2)
  unclassified
(1)
  all
(28)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM692613 Pooled tissue resistant 0 Nofima Marin 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Labeo rohita) (GPL13291) SRA Labeo rohita
Labeo rohita
pooled liver, intestine, muscle, kidney, spleen, brain tissues
2 GSM692614 Pooled tissue susceptible 0 Nofima Marin 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Labeo rohita) (GPL13291) SRA Labeo rohita
Labeo rohita
pooled liver, intestine, muscle, kidney, spleen, brain tissues
3 GSM694305 Chicken_muscle 0 Peking University 2011-03-22 [HT Sequencing] Illumina Genome Analyzer II (Gallus gallus) (GPL9385) SRA Gallus gallus
Gallus gallus
muscle Skeletal muscle
4 GSM686381 embryo_256-cell_rep1 0 Vanderbilt University 2011-03-07 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio
embryo the whole embryo
5 GSM686382 embryo_sphere_rep1 0 Vanderbilt University 2011-03-07 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio
embryo the whole embryo
6 GSM686383 embryo_sphere_rep2 0 Vanderbilt University 2011-03-07 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio
embryo the whole embryo
7 GSM686384 embryo_Shield_rep1 0 Vanderbilt University 2011-03-07 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio
embryo the whole embryo
8 GSM686385 embryo_1dpf_rep1 0 Vanderbilt University 2011-03-07 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio
embryo the whole embryo
9 GSM691016 RBC 5d 0 CRG 2011-03-14 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
peripheral blood Red blood cells
10 GSM691017 RBC 10d 0 CRG 2011-03-14 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
peripheral blood Red blood cells
11 GSM697419 embryonic digit stage 28/29 EF1_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
12 GSM697420 embryonic digit stage 28/29 EF2_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
13 GSM697421 embryonic digit stage 28/29 EF3_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
14 GSM697422 embryonic digit stage 28/29 EH1_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
15 GSM697423 embryonic digit stage 28/29 EH2_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
16 GSM697424 embryonic digit stage 28/29 EH3_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
17 GSM697425 embryonic digit stage 28/29 EH4_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
18 GSM697426 embryonic digit stage 31 LF1_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
19 GSM697427 embryonic digit stage 31 LF2_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
20 GSM697428 embryonic digit stage 31 LF3_mRNAseq 0 Yale University 2011-03-24 [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) SRA Gallus gallus
Gallus gallus
embryo Embryonic chicken digit
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