Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(4)
  Tiling Array
(1)
  cDNA Array
(3)
  Oligo Array
(34)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(6)
  Other
(0)
  All
(49)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Zebrafish: Estrogen induced gene expression (GSE27707) [Oligo Array] Zf_16.5K_oligo_COMP_v3Apx (GPL2715) Genome Institute of Singapore 2011-03-07 Danio rerio
Danio rerio
165,120
(16,512 x 10)
10 by_platform
by_series
2 Zebrafish hdac1 mutant and morphant embryos (GSE26710) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
910,770
(43,370 x 21)
13 8 by_platform
by_series
3 Zebrafish embryos: hdac1 Morphants vs Standard control morphants at 12, 18 and 27 hpf (GSE26709) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
390,330
(43,370 x 9)
9 by_platform
by_series
4 Zebrafish embryos: hdac1 Morphants vs Standard control morphants (GSE26708) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
260,220
(43,370 x 6)
6 by_platform
by_series
5 Zebrafish 27hpf embryos: hdac1 mutant (hi1618) vs sibling (GSE26707) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
346,960
(43,370 x 8)
8 by_platform
by_series
6 Transcriptomic profiles of Japanese medaka (Oryzias latipes) in response to alkalinity stress (GSE27298) [Oligo Array] Agilent-023673 ECSFRI medaka 4x44K (GPL13167) East China Sea Fisheries Research Institute 2011-02-14 Oryzias latipes
Oryzias latipes
158,934
(26,489 x 6)
6 by_platform
by_series
7 Transcriptional targets of Xenopus EBF3 in the absence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps (GSE27084) [Oligo Array] Agilent Xenopus laevis 22k AMADID-013665 (GPL10302) University of Utah 2011-02-04 Xenopus laevis
Xenopus laevis
42,990
(21,495 x 2)
2 by_platform
by_series
8 Transcriptional Response of Zebrafish Embryos Exposed to Neurotoxic Compounds Reveals a Muscle Activity Dependent hspb11 Expression (GSE27680) [Oligo Array] Agilent-015064 D. rerio (Zebrafish) Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6563) UFZ Helmholtz Centre for Environmental Research 2011-03-04 Danio rerio
Danio rerio
1,447,040
(45,220 x 32)
32 by_platform
by_series
9 The impact of chronic temperature elevation on the spleen anti-viral transcriptomic response in Atlantic cod (Gadus morhua) (GSE27299) [Oligo Array] CGP Atlantic cod 20K oligo array v1.0 (GPL10532) Memorial University of Newfoundland 2011-02-14 Gadus morhua
Gadus morhua
1,200,000
(20,000 x 60)
60 by_platform
by_series
10 Sexually dimorphic transcriptomic responses in the largemouth bass to the neuroactive pesticide dieldrin (GSE27963) [Oligo Array] LMB microarray 15K (Agilent format) (GPL13229) UF 2011-03-15 Micropterus salmoides
Micropterus salmoides
304,160
(15,208 x 20)
20 by_platform
by_series
11 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in spleen of Atlantic salmon (GSE26984) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ4 (GPL10706) Nofima AS 2011-01-31 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
12 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in skin of Atlantic salmon (GSE26981) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) Nofima AS 2011-01-31 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
13 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in Atlantic salmon (GSE27013) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) Nofima AS 2011-02-02 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
14 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in Atlantic salmon (GSE27013) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ4 (GPL10706) Nofima AS 2011-02-02 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
15 Nuclear Factor Kappa B is central to Marek’s Disease lymphomagenesis (GSE28034) [Oligo Array] Chicken 44K custom Agilent microarray (GPL4993) Texas A&M University 2011-03-18 Gallus gallus
Gallus gallus
168,136
(42,034 x 4)
4 by_platform
by_series
16 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus laevis Custom Microarray (GPL13127) Technion - Israel Institute of Technology 2011-02-10 Xenopus laevis
Xenopus laevis
2,102,544
(43,803 x 48)
48 by_platform
by_series
17 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus tropicalis Custom Microarray (GPL13126) Technion - Israel Institute of Technology 2011-02-10 Xenopus (Silurana) tropicalis
Xenopus tropicalis
2,102,544
(43,803 x 48)
48 by_platform
by_series
18 Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (expression array) (GSE28239) [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) Brigham and Women's Hospital/Harvard Medical School 2011-03-29 Danio rerio
Danio rerio
316,540
(45,220 x 7)
7 by_platform
by_series
19 Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M) (GSE28276) [Oligo Array] Agilent-026161 ZV81M (GPL13352) Brigham and Women's Hospital/Harvard Medical School 2011-03-30 Danio rerio
Danio rerio
6,818,112
(974,016 x 7)
7 by_platform
by_series
20 Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M 2) (GSE28278) [Oligo Array] Agilent-026161 ZV81M (GPL13352) Brigham and Women's Hospital/Harvard Medical School 2011-03-30 Danio rerio
Danio rerio
74,025,216
(974,016 x 76)
76 by_platform
by_series
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