Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(13)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(2,708)
  Tiling Array
(76)
  cDNA Array
(6,040)
  Oligo Array
(8,729)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(46)
  HT-Seq
(626)
  Other
(5)
  All
(18,263)
 
  brain
(1)
  blood
(0)
  connective
(0)
  reproductive
(1)
  muscular
(0)
  digestive
(1)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(1)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(1)
  all
(5)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM154489 PET counts from adult brain 228,263 Genome Institute Of Singapore 2007-01-09 [Other] Zebrafish Paired End DiTags (GPL4737) RNA Danio rerio
Danio rerio
cerebrum Adult Brain
2 GSM154488 PET counts from embryos 155,706 Genome Institute Of Singapore 2007-01-09 [Other] Zebrafish Paired End DiTags (GPL4737) RNA Danio rerio
Danio rerio
embryo Embryos
3 GSM154487 PET counts from adult gut/internal organs 145,522 Genome Institute Of Singapore 2007-01-09 [Other] Zebrafish Paired End DiTags (GPL4737) RNA Danio rerio
Danio rerio
intestine Adult Gut/Internal Organs
4 GSM154491 PET counts from adult ovary 130,744 Genome Institute Of Singapore 2007-01-09 [Other] Zebrafish Paired End DiTags (GPL4737) RNA Danio rerio
Danio rerio
ovary Adult Ovary
5 GSM154490 PET counts from whole adult fish 62,109 Genome Institute Of Singapore 2007-01-09 [Other] Zebrafish Paired End DiTags (GPL4737) RNA Danio rerio
Danio rerio
unclassified source_name:Whole Adult Fish title:PET counts from whole adult fish description:Paired End DiTags (PET) library, SDR001_177373U_29082006_nr2_v1.