Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)
  Primates
(5,069)
  Rodents
(189,292)
  Mammals
(16,929)
  Vertebrates
(18,759)
  Invertebrates
(38,793)
  Plants
(93,301)
  Bacteria
(39,613)
  Viruses
(1,263)
  Phages
(101)
  Unclassified
(5,497)
  All
(931,947)
 
  SAGE NlaIII
(13)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(2,745)
  Tiling Array
(76)
  cDNA Array
(6,153)
  Oligo Array
(8,968)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(46)
  HT-Seq
(733)
  Other
(5)
  All
(18,759)
 
  brain
(0)
  blood
(6)
  connective
(0)
  reproductive
(2)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(7)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(61)
  all
(76)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM947589 RCS-M 385,002 University of Maryland 2012-06-13 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
peripheral blood Genomic DNA from RCS-M red blood cells Genomic DNA from Red Junglefowl red blood cells
2 GSM947588 RCS-L 385,002 University of Maryland 2012-06-13 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
peripheral blood Genomic DNA from RCS-L red blood cells Genomic DNA from Red Junglefowl red blood cells
3 GSM947587 L72-2 375,227 University of Maryland 2012-06-13 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
peripheral blood Genomic DNA from L72 red blood cells Genomic DNA from Red Junglefowl red blood cells
4 GSM947586 L72-1 385,002 University of Maryland 2012-06-13 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
peripheral blood Genomic DNA from L72 red blood cells Genomic DNA from Red Junglefowl red blood cells
5 GSM947585 L63-2 385,002 University of Maryland 2012-06-13 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
peripheral blood Genomic DNA from L63 red blood cells Genomic DNA from Red Junglefowl red blood cells
6 GSM947584 L63-1 375,227 University of Maryland 2012-06-13 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
peripheral blood Genomic DNA from L63 red blood cells Genomic DNA from Red Junglefowl red blood cells
7 GSM914002 emb24h_MeDIP Repl2 2,168,225 University of Oslo 2012-04-12 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:emb24h MeDIP ChIP DNA emb24h MeDIP Input DNA title:emb24h_MeDIP Repl2
8 GSM914001 emb24h_MeDIP Repl1 2,168,225 University of Oslo 2012-04-12 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:emb24h MeDIP ChIP DNA emb24h MeDIP Input DNA title:emb24h_MeDIP Repl1
9 GSM914000 sperm_MeDIP Repl2 2,168,225 University of Oslo 2012-04-12 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
testis sperm MeDIP ChIP DNA sperm MeDIP Input DNA
10 GSM913999 sperm_MeDIP Repl1 2,168,225 University of Oslo 2012-04-12 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
testis sperm MeDIP ChIP DNA sperm MeDIP Input DNA
11 GSM822662 ZF4_MeDIP_Repl2 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MeDIP ChIP DNA MeDIP Input DNA from ZF4 cells title:ZF4_MeDIP_Repl2
12 GSM822661 ZF4_MeDIP_Repl1 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MeDIP ChIP DNA MeDIP Input DNA from ZF4 cells title:ZF4_MeDIP_Repl1
13 GSM822660 postMBT_MeDIP Repl2 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:postMBT MeDIP ChIP DNA postMBT MeDIP Input DNA title:postMBT_MeDIP Repl2
14 GSM822659 postMBT_MeDIP Repl1 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:postMBT MeDIP ChIP DNA postMBT MeDIP Input DNA title:postMBT_MeDIP Repl1
15 GSM822658 MBT_MeDIP Repl2 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT MeDIP ChIP DNA MBT MeDIP Input DNA title:MBT_MeDIP Repl2
16 GSM822657 MBT_MeDIP Repl1 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT MeDIP ChIP DNA MBT MeDIP Input DNA title:MBT_MeDIP Repl1
17 GSM822656 preMBT_MeDIP Repl2 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:preMBT MeDIP ChIP DNA preMBT MeDIP Input DNA title:preMBT_MeDIP Repl2
18 GSM822655 preMBT_MeDIP Repl1 2,168,225 University of Oslo 2011-10-26 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:preMBT MeDIP ChIP DNA preMBT MeDIP Input DNA title:preMBT_MeDIP Repl1
19 GSM675198 preMBT_polii Repl1 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:preMBT polii ChIP DNA preMBT polii Input DNA title:preMBT_polii Repl1
20 GSM675197 preMBT_H3K9me3 Repl1 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:preMBT H3K9me3 ChIP DNA preMBT H3K9me3 Input DNA title:preMBT_H3K9me3 Repl1
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