Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(13)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(3,128)
  Tiling Array
(76)
  cDNA Array
(6,517)
  Oligo Array
(11,209)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(46)
  HT-Seq
(1,567)
  Other
(5)
  All
(22,581)
 
  brain
(0)
  blood
(6)
  connective
(0)
  reproductive
(2)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(7)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(61)
  all
(76)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM485166 6191_BF 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:6191_BF 6281_BM title:6191_BF description:Segmental copy number variation
2 GSM485167 6953_LM 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:6953_LM 6281_BM title:6953_LM description:Segmental copy number variation
3 GSM485168 6262_BM 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:6262_BM 6281_BM title:6262_BM description:Segmental copy number variation
4 GSM485169 2916_BF 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:2916_BF 6281_BM title:2916_BF description:Segmental copy number variation
5 GSM485170 6951_LM 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:6951_LM 6281_BM title:6951_LM description:Segmental copy number variation
6 GSM485171 5849_BF 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:5849_BF 6281_BM title:5849_BF description:Segmental copy number variation
7 GSM485172 6870_LF 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:6870_LF 6281_BM title:6870_LF description:Segmental copy number variation
8 GSM485173 6884_LF 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:6884_LF 6281_BM title:6884_LF description:Segmental copy number variation
9 GSM485174 1003_RM 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:1003_RM 6281_BM title:1003_RM description:Segmental copy number variation
10 GSM485175 1007_RM 385,002 Tennessee State University 2009-12-14 [Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) genomic Gallus gallus
Gallus gallus
unclassified source_name:1007_RM 6281_BM title:1007_RM description:Segmental copy number variation
11 GSM581033 ZF4_H3K4me3_Repl1 2,168,225 University of Oslo 2010-08-18 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:H3K4me3 ChIP DNA Input DNA from ZF4 cells title:ZF4_H3K4me3_Repl1
12 GSM581034 ZF4_H3K4me3_Repl2 2,168,225 University of Oslo 2010-08-18 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:H3K4me3 ChIP DNA Input DNA from ZF4 cells title:ZF4_H3K4me3_Repl2
13 GSM581035 ZF4_H3K27me3_Repl1 2,168,225 University of Oslo 2010-08-18 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:H3K27me3 ChIP DNA Input DNA from ZF4 cells title:ZF4_H3K27me3_Repl1
14 GSM581036 ZF4_H3K27me3_Repl2 2,168,225 University of Oslo 2010-08-18 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:H3K27me3 ChIP DNA Input DNA from ZF4 cells title:ZF4_H3K27me3_Repl2
15 GSM675174 MBT_H3K27me3 Repl1 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT H3K27me3 ChIP DNA MBT H3K27me3 Input DNA title:MBT_H3K27me3 Repl1
16 GSM675175 MBT_H3K27me3 Repl2 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT H3K27me3 ChIP DNA MBT H3K27me3 Input DNA title:MBT_H3K27me3 Repl2
17 GSM675176 MBT_H3K36me3 Repl1 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT H3K36me3 ChIP DNA MBT H3K36me3 Input DNA title:MBT_H3K36me3 Repl1
18 GSM675177 MBT_H3K36me3 Repl2 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT H3K36me3 ChIP DNA MBT H3K36me3 Input DNA title:MBT_H3K36me3 Repl2
19 GSM675178 MBT_H3K4me3 Repl1 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT H3K4me3 ChIP DNA MBT H3K4me3 Input DNA title:MBT_H3K4me3 Repl1
20 GSM675179 MBT_H3K4me3 Repl2 2,168,225 University of Oslo 2011-02-14 [Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) genomic Danio rerio
Danio rerio
unclassified source_name:MBT H3K4me3 ChIP DNA MBT H3K4me3 Input DNA title:MBT_H3K4me3 Repl2
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