Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(547)
  Primates
(8)
  Rodents
(358)
  Mammals
(33)
  Vertebrates
(31)
  Invertebrates
(73)
  Plants
(202)
  Bacteria
(116)
  Viruses
(0)
  Phages
(0)
  Unclassified
(9)
  All
(1,379)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(12)
  Tiling Array
(0)
  cDNA Array
(7)
  Oligo Array
(10)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(1)
  Other
(0)
  All
(31)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Salmonella typhimurium infection of zebrafish embryo (GSE13994) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Leiden 2008-12-16 Danio rerio
Danio rerio
1,561,320
(43,370 x 36)
36 by_platform
by_series
2 Divergent gene-expression profiles between proepicardium and epicardium differentiation (GSE13923) [Oligo Array] ARK-Genomics G. gallus 20K v1.0 (GPL5480) Leiden University Medical Center 2008-12-12 Gallus gallus
Gallus gallus
1,419,264
(22,176 x 64)
64 by_platform
by_series
3 Salmon Spawning Migration: Metabolic Shifts and Environmental Triggers (GSE13657) [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) Fisheries and Oceans Canada 2008-11-18 Oncorhynchus nerka
Oncorhynchus nerka
1,386,240
(17,328 x 80)
80 by_platform
by_series
4 Transcriptome analysis of the zebrafish pineal gland (GSE13371) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) NIH 2008-10-27 Danio rerio
Danio rerio
1,077,573
(15,617 x 69)
69 by_platform
by_series
5 Gene expression signatures for 17α-ethinylestradiol and ZM 189,154, singly and combined, in fathead minnow testis (GSE14235) [Oligo Array] EcoArray Fathead minnow 44K v1.0 (GPL7282) Mississippi State University 2008-12-30 Pimephales promelas
Pimephales promelas
888,140
(44,407 x 20)
20 by_platform
by_series
6 Analysis of Genes in the Hypothalamus Controlling Feed Intake and Energy Metabolism in Neonatal Chicks (GSE13257) [Oligo Array] Arizona Gallus gallus 20.7K Oligo Array v1.0 (GPL6049) University of Maryland 2008-10-17 Gallus gallus
Gallus gallus
844,800
(21,120 x 40)
40 by_platform
by_series
7 Effects of trenbolone, flutamide and a mix of both in fathead minnow ovaries (GSE14100) [Oligo Array] EcoArray Fathead minnow 44K v1.0 (GPL7282) Mississippi State University 2008-12-22 Pimephales promelas
Pimephales promelas
710,512
(44,407 x 16)
16 by_platform
by_series
8 Domestication and growth hormone transgenesis cause similar changes in gene expression profiles in coho salmon (GSE13846) [cDNA Array] GRASP 16K version 2 (GPL2716) Fisheries and Oceans Canada 2008-12-05 Oncorhynchus kisutch
Oncorhynchus kisutch
502,512
(17,328 x 29)
14 15 by_platform
by_series
9 Transcriptome profiling of embryonic development rate in rainbow trout advance backcross introgression lines (GSE13570) [cDNA Array] GRASP 16K version 2 (GPL2716) Purdue University 2008-11-12 Oncorhynchus mykiss
Oncorhynchus mykiss
415,872
(17,328 x 24)
24 by_platform
by_series
10 Foggy mutant: brain (Guo-1R01NS042626-01A2) (GSE13348) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Translational Genomics 2008-10-24 Danio rerio
Danio rerio
249,872
(15,617 x 16)
16 by_platform
by_series
11 Identification of the molecular signatures integral to regenerating photoreceptors in the retina of the zebrafish (GSE13068) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Michigan 2008-10-06 Danio rerio
Danio rerio
234,255
(15,617 x 15)
15 by_platform
by_series
12 Expression data from zebrafish pineal gland (GSE13196) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Tel Aviv University 2008-10-14 Danio rerio
Danio rerio
218,638
(15,617 x 14)
14 by_platform
by_series
13 Gene expression signatures for 17α-ethinylestradiol and ZM 189,154, singly and combined, in fathead minnow testis (GSE14235) [Oligo Array] US EPA Ecoarray FHM Pimephales promelas 10K 2000 gene (pilot) array (GPL6516) Mississippi State University 2008-12-30 Pimephales promelas
Pimephales promelas
205,240
(10,262 x 20)
20 by_platform
by_series
14 The role of ERbeta2 in zebrafish neuromasts development (GSE13771) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) eawag 2008-12-01 Danio rerio
Danio rerio
187,404
(15,617 x 12)
12 by_platform
by_series
15 Halibut Soydiet Series (GSE13025) [Oligo Array] Atlantic halibut 40K Array (GPL6361) National Research Council 2008-10-02 Hippoglossus hippoglossus
Hippoglossus hippoglossus
179,712
(9,984 x 18)
18 by_platform
by_series
16 Sex biased gene expression in 17 weeks old chicken (ovary, testes) (GSE14013) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Charles University in Prague 2008-12-17 Gallus gallus
Gallus gallus
154,140
(38,535 x 4)
4 by_platform
by_series
17 Enriched genes in the primary mouth of Xenopus laevis (GSE13377) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) Whitehead Institute 2008-10-28 Xenopus laevis
Xenopus laevis
140,499
(15,611 x 9)
9 by_platform
by_series
18 The cellular expression of midkine-a and midkine-b during retinal development and photoreceptor regeneration (GSE13999) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Michigan 2008-12-16 Danio rerio
Danio rerio
124,936
(15,617 x 8)
8 by_platform
by_series
19 Halibut Microdiet Series (GSE13024) [Oligo Array] Atlantic halibut 40K Array (GPL6361) National Research Council 2008-10-02 Hippoglossus hippoglossus
Hippoglossus hippoglossus
119,808
(9,984 x 12)
12 by_platform
by_series
20 Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation (GSE13482) [Oligo Array] Zebrafish Oligonucleotide Library (Compugen) (GPL7556) University of Oregon 2008-11-05 Danio rerio
Danio rerio
98,394
(16,399 x 6)
6 by_platform
by_series
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