Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(808)		   Primates
(6)		   Rodents
(475)		   Mammals
(45)		   Vertebrates
(47)		   Invertebrates
(302)		   Plants
(266)		   Bacteria
(116)		   Viruses
(1)		   Phages
(0)		   Unclassified
(8)		   All
(2,076)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(14)		   Tiling Array
(0)		   cDNA Array
(5)		   Oligo Array
(23)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(5)		   Other
(0)		   All
(47)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns (GSE24616) [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) Max-Planck-Institute for evolutinonary biology 2010-10-11 Danio rerio
Danio rerio		 6,647,340
(45,220 x 147) 		2 23 122 by_platform
by_series
2 Spleen transcriptome response to infection with avian pathogenic Escherichia coli in broiler chickens (GSE25511) [Oligo Array] Chicken 44K custom Agilent microarray (2nd version) (GPL6413) Iowa State University 2010-11-19 Gallus gallus
Gallus gallus		 3,153,816
(43,803 x 72) 		72 by_platform
by_series
3 Developmental stages after fertilization in Salmo salar (GSE25938) [Oligo Array] Agilent-025055 Koop Lab Salmonid 44k (GPL11299) The University of Victoria 2010-12-08 Salmo salar
Salmo salar		 2,228,139
(43,689 x 51) 		51 by_platform
by_series
4 Image defocus and altered retinal gene expression in chicks (GSE24641) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) University of Pennsylvania School of Medicine 2010-10-12 Gallus gallus
Gallus gallus		 1,849,680
(38,535 x 48) 		24 24 by_platform
by_series
5 Gene expression profiling of fathead minnows (Pimephales promelas) following an acute exposure to pulp and paper mill effluents (GSE25928) [Oligo Array] EcoArray Fathead minnow 44K v1.0 (GPL7282) Lakehead University 2010-12-08 Pimephales promelas
Pimephales promelas		 1,065,768
(44,407 x 24) 		24 by_platform
by_series
6 Liver-expressed antimicrobial peptide-2 is downregulated in Eimeria maxima-infected chickens (GSE25588) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Virginia Tech 2010-11-23 Gallus gallus
Gallus gallus		 616,560
(38,535 x 16) 		16 by_platform
by_series
7 Arctic charr exposed to acute thermal stress (GSE26306) [cDNA Array] cGRASP 32K (Salmonid) cDNA - Release Date 02/08 (GPL10096) Simon Fraser University 2010-12-27 Salvelinus alpinus,Salmo salar
Salvelinus alpinus,Salmo salar		 606,528
(33,696 x 18) 		18 by_platform
by_series
8 Tetradecylthioacetic acid effect on heart ventricle (GSE25305) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) NOFIMA marine 2010-11-12 Salmo salar
Salmo salar		 587,860
(45,220 x 13) 		13 by_platform
by_series
9 Molecular dissection of the migrating posterior lateral line primordium during early development in zebrafish (GSE25617) [Oligo Array] Zebrafish 34K (Compugen, MWG, Operon) (GPL4021) NHGRI/NIH 2010-11-26 Danio rerio
Danio rerio		 554,352
(34,647 x 16) 		16 by_platform
by_series
10 Identification and developmental expression of the full complement of cytochrome P450 genes in zebrafish (GSE24840) [Oligo Array] WHOI Zebrafish 44k v1.0 custom-commercial Chemical Defensome (GPL11077) Woods Hole Oceanographic Institution 2010-10-20 Danio rerio
Danio rerio		 525,432
(21,893 x 24) 		24 by_platform
by_series
11 Tetradecylthioacetic acid effect on heart ventricle (GSE25305) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ2 (GPL10679) NOFIMA marine 2010-11-12 Salmo salar
Salmo salar		 497,420
(45,220 x 11) 		11 by_platform
by_series
12 Influence of Deoxynivalenol-contaminated diet on the liver gene expression of chicken. (GSE25185) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) ETH Zurich 2010-11-08 Gallus gallus
Gallus gallus		 462,420
(38,535 x 12) 		12 by_platform
by_series
13 Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic killifish (Fundulus heteroclitus) from a marine Superfund site (GSE25245) [cDNA Array] Rosenstiel School of Marine and Atmospheric Sciences, Crawford and Oleksiak Laboratories, Fundulus heteroclitus 7K array (GPL11189) University of Miami 2010-11-09 Fundulus heteroclitus
Fundulus heteroclitus		 457,128
(6,349 x 72) 		72 by_platform
by_series
14 Confinement stress in HR and LR trout lines (GSE25584) [Oligo Array] Aquafirst_Trout (GPL11206) NUI Galway 2010-11-23 Oncorhynchus mykiss
Oncorhynchus mykiss		 454,608
(11,088 x 41) 		21 20 by_platform
by_series
15 Anti-inflammatory effects of tetradecylthioacetic acid (TTA) in macrophage-like cells from Atlantic salmon (Salmo salar L.) (GSE25328) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) NOFIMA marine 2010-11-15 Salmo salar
Salmo salar		 361,760
(45,220 x 8) 		8 by_platform
by_series
16 Gene expression in broiler livers upon supplementation with selenized yeast (GSE25151) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) ETH Zurich 2010-11-04 Gallus gallus
Gallus gallus		 346,815
(38,535 x 9) 		9 by_platform
by_series
17 Anti-inflammatory effects of tetradecylthioacetic acid (TTA) in macrophage-like cells from Atlantic salmon (Salmo salar L.) (GSE25328) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ2 (GPL10679) NOFIMA marine 2010-11-15 Salmo salar
Salmo salar		 316,540
(45,220 x 7) 		7 by_platform
by_series
18 Expression analysis of melanoma harvested after GFP or SETDB1 expression (GSE26372) [Oligo Array] Nimblegen Danio rerio Zv7 37K array (GPL10392) Childrens Hospital Boston 2010-12-30 Danio rerio
Danio rerio		 297,408
(37,176 x 8) 		8 by_platform
by_series
19 The effects of novel adjuvant complex and CpG ODN on host immune response to recombinant Eimeria profilin vaccine (GSE24966) [Oligo Array] Agilent-015068 Chicken Gene Expression Microarray 4x44k (Feature Number version) (GPL8764) USDA, ARS 2010-10-27 Gallus gallus
Gallus gallus		 271,320
(45,220 x 6) 		6 by_platform
by_series
20 Expression analysis of zebrafish melanoma and skin from the mitf-BRAFV600E;p53-/- line (GSE24528) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Children's Hospital Boston 2010-10-05 Danio rerio
Danio rerio		 234,255
(15,617 x 15) 		15 by_platform
by_series
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