Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(73)		   Primates
(0)		   Rodents
(51)		   Mammals
(15)		   Vertebrates
(15)		   Invertebrates
(43)		   Plants
(47)		   Bacteria
(43)		   Viruses
(1)		   Phages
(0)		   Unclassified
(12)		   All
(306)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(1)		   Tiling Array
(0)		   cDNA Array
(2)		   Oligo Array
(6)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(6)		   Other
(0)		   All
(15)		  
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL11041 Agilent-019553 Gallus gallus (chicken) Genome CGH Microarray 244K(Feature Number version) 243,504 Agilent Technologies 2010-10-12 Agilent Technologies Gallus gallus
Gallus gallus		 Oligo Array in situ oligonucleotide, Agilent-019553 Gallus gallus (chicken) Genome CGH Microarray 244K(Feature Number version), Gallus gallus (chicken) Genome CGH Microarray 244K Design ID: 019553 Control Grid: IS-243504-1-V1_244K_CGH_Gga_20080227 Arrays of this design have barcodes that begin with 16019553 or 2519553. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL15501.
2 GPL11299 Agilent-025055 Koop Lab Salmonid 44k 43,689 The University of Victoria 2010-12-08 Agilent Technologies Salmo salar
Salmo salar		 Oligo Array in situ oligonucleotide, Agilent-025055 Koop Lab Salmonid 44k, Arrays of this design have barcodes that begin with 16025055 or 2525055.
3 GPL11077 WHOI Zebrafish 44k v1.0 custom-commercial Chemical Defensome 21,893 Woods Hole Oceanographic Institution 2010-10-20 Agilent Danio rerio
Danio rerio		 Oligo Array in situ oligonucleotide, WHOI Zebrafish 44k v1.0 custom-commercial Chemical Defensome,
4 GPL11258 Agilent-015066 Xenopus Gene Expression Microarray (Probe Name version) 21,495 Agilent Technologies 2010-12-01 Agilent Technologies Xenopus laevis
Xenopus laevis		 Oligo Array in situ oligonucleotide, Agilent-015066 Xenopus Gene Expression Microarray (Probe Name version), Xenopus laevis (Frog) Oligo Microarray by Agilent Technologies Arrays of this design have barcodes that begin with 16015066 or 2515066. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Probe Name.
5 GPL11161 Turbot-USCMicroarray2.0 14,501 Universidad Santiago Compostela 2010-11-04 Agilent Psetta maxima
Psetta maxima		 Oligo Array in situ oligonucleotide, Turbot-USCMicroarray2.0,
6 GPL11206 Aquafirst_Trout 11,088 NUI Galway 2010-11-15 Ouest Genopole (Nantes) Oncorhynchus mykiss
Oncorhynchus mykiss		 Oligo Array in situ oligonucleotide, Aquafirst_Trout,
7 GPL11151 Rainbow trout 8k 8,074 Tim Cavileer 2010-11-01 Affymetrix Oncorhynchus mykiss
Oncorhynchus mykiss		 GeneChip in situ oligonucleotide, Rainbow trout 8k, 49 - NimbleExpress sense design
8 GPL11189 Rosenstiel School of Marine and Atmospheric Sciences, Crawford and Oleksiak Laboratories, Fundulus heteroclitus 7K array 6,349 University of Miami 2010-11-09 Rosenstiel School of Marine and Atmospheric Sciences, Crawford and Oleksiak Laboratories Fundulus heteroclitus
Fundulus heteroclitus		 cDNA Array spotted DNA/cDNA, Rosenstiel School of Marine and Atmospheric Sciences, Crawford and Oleksiak Laboratories, Fundulus heteroclitus 7K array,
9 GPL11020 NIBB Xenopus laevis 4.6K 4,608 Hiroshima University 2010-10-06 Division of Morphogenesis, National Institute for Basic Biology, Nishigonaka, Myodaiji, Okazaki, Aichi 444-8585, Japan. Xenopus laevis
Xenopus laevis		 cDNA Array spotted DNA/cDNA, NIBB Xenopus laevis 4.6K,
10 GPL11029 454 GS 20 (Petromyzon marinus) 0 2010-10-08 Petromyzon marinus
Petromyzon marinus		 HT Sequencing high-throughput sequencing, 454 GS 20 (Petromyzon marinus),
11 GPL11102 454 GS (Danio rerio) 0 2010-10-22 Danio rerio
Danio rerio		 HT Sequencing high-throughput sequencing, 454 GS (Danio rerio),
12 GPL11303 Illumina Genome Analyzer (Paralichthys olivaceus) 0 2010-12-10 Paralichthys olivaceus
Paralichthys olivaceus		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer (Paralichthys olivaceus),
13 GPL11347 Illumina Genome Analyzer II (Leucoraja erinacea) 0 2010-12-21 Leucoraja erinacea
Leucoraja erinacea		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer II (Leucoraja erinacea),
14 GPL11348 Illumina Genome Analyzer II (Scyliorhinus canicula) 0 2010-12-21 Scyliorhinus canicula
Scyliorhinus canicula		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer II (Scyliorhinus canicula),
15 GPL11349 Illumina Genome Analyzer II (Callorhinchus milii) 0 2010-12-21 Callorhinchus milii
Callorhinchus milii		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer II (Callorhinchus milii),
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