| 1 |
Extensive genetic diversity and substructuring among zebrafish strains revealed through copy number variant analysis (GSE28328) |
[Oligo Array] Agilent-026161 ZV81M (GPL13352) |
Brigham and Women's Hospital/Harvard Medical School |
2011-04-01 |
Danio rerio
 |
83,765,376
(974,016 x 86)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
86 |
|
by_platform
by_series |
| 2 |
Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M 2) (GSE28278) |
[Oligo Array] Agilent-026161 ZV81M (GPL13352) |
Brigham and Women's Hospital/Harvard Medical School |
2011-03-30 |
Danio rerio
|
74,025,216
(974,016 x 76)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
76 |
|
by_platform
by_series |
| 3 |
Marking of the genome by H3K4 methylation prior to embryonic gene activation (GSE27314) |
[Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) |
University of Oslo |
2011-02-14 |
Danio rerio
|
54,205,625
(2,168,225 x 25)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25 |
by_platform
by_series |
| 4 |
Developmental features of DNA methylation during activation of the embryonic zebrafish genome (GSE33236) |
[Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) |
University of Oslo |
2011-10-26 |
Danio rerio
|
26,018,700
(2,168,225 x 12)
|
|
|
|
2 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
10 |
by_platform
by_series |
| 5 |
The impact of experience-dependent and independent factors on gene expression in songbird brain (GSE36748) |
[cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) |
University of Illinois |
2012-03-23 |
Taeniopygia guttata,Sturnus vulgaris
 |
9,838,080
(20,160 x 488)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
488 |
by_platform
by_series |
| 6 |
Mapping of H3K4 and H3K27 trimethylation in zebrafish cells (ChIP-chip) (GSE23691) |
[Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) |
University of Oslo |
2010-08-18 |
Danio rerio
|
8,672,900
(2,168,225 x 4)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
4 |
by_platform
by_series |
| 7 |
Mapping of H3K4 and H3K27 trimethylation in zebrafish cells (GSE23872) |
[Tiling Array] 090313_Zv7_PC_ChIP_HX1 (GPL10835) |
University of Oslo |
2010-08-30 |
Danio rerio
|
8,672,900
(2,168,225 x 4)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
4 |
by_platform
by_series |
| 8 |
The singing genome: Core and region enriched gene expression define behaviorally regulated gene networks (GSE33365) |
[Oligo Array] Duke Taeniopygia guttata 45K (GPL9856) |
Duke University |
2011-11-01 |
Taeniopygia guttata
 |
7,644,730
(44,969 x 170)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
170 |
by_platform
by_series |
| 9 |
Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M) (GSE28276) |
[Oligo Array] Agilent-026161 ZV81M (GPL13352) |
Brigham and Women's Hospital/Harvard Medical School |
2011-03-30 |
Danio rerio
|
6,818,112
(974,016 x 7)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
7 |
|
by_platform
by_series |
| 10 |
A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns (GSE24616) |
[Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) |
Max-Planck-Institute for evolutinonary biology |
2010-10-11 |
Danio rerio
|
6,647,340
(45,220 x 147)
|
|
|
|
2 |
|
|
|
|
|
|
23 |
|
|
|
|
|
|
|
122 |
by_platform
by_series |
| 11 |
ChIP-chip Designs to Interrogate the Xenopus Embryo Genome for Transcription Factor Binding and Epigenetic Regulation (GSE19413) |
[Oligo Array] NimbleGen Xenopus tropicalis Dedicated Promoter v1.0 (GPL9785) |
Radboud University |
2009-12-10 |
Xenopus (Silurana) tropicalis
 |
5,854,017
(1,951,339 x 3)
|
|
|
|
|
|
|
|
|
|
|
3 |
|
|
|
|
|
|
|
|
by_platform
by_series |
| 12 |
Nutrigenomics study in Atlantic salmon (Salmo salar) fed novel diets supplemented with marine by-products (GSE41325) |
[Oligo Array] Agilent-025055 Koop Lab Salmonid 44k (GPL11299) |
Fisheries & Oceans Canada |
2012-10-03 |
Salmo salar
 |
5,242,680
(43,689 x 120)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
120 |
by_platform
by_series |
| 13 |
Discovery and validation of gene classifiers for endocrine disrupting chemicals in Zebrafish (Danio rerio) (GSE38070) |
[Oligo Array] Agilent-015064 D. rerio (Zebrafish) Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7302) |
US EPA |
2012-05-21 |
Danio rerio
|
4,982,670
(21,570 x 231)
|
50 |
|
|
160 |
|
|
21 |
|
|
|
|
|
|
|
|
|
|
|
|
by_platform
by_series |
| 14 |
Expression analysis of zebrafish TIF1g-deficient, cdc73 deficient and double-deficient embryos (GSE20432) |
[Oligo Array] Children's Hospital Boston Danio rerio 385K Array [071105_Zv7] (GPL10076) |
Children's Hospital Boston |
2010-02-19 |
Danio rerio
|
4,620,000
(385,000 x 12)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
12 |
by_platform
by_series |
| 15 |
Chromatin signature of embryonic pluripotency is established during zygotic genome activation [Danio rerio] (GSE20023) |
[Tiling Array] NimbleGen Danio rerio 385K Zv7 tiling array (GPL9970) |
Tongji University |
2010-01-25 |
Danio rerio
|
4,207,284
(350,607 x 12)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
12 |
by_platform
by_series |
| 16 |
Transcriptional response of Atlantic salmon (Salmo salar) after primary versus secondary exposure to Infectious Salmon Anemia Virus (ISAV) (GSE28357) |
[Oligo Array] Agilent-020938 S. salar (Salmon) Oligo Microarray (Probe Name version) (GPL7303) |
Fisheries & Oceans Canada |
2011-04-04 |
Salmo salar
|
4,147,985
(43,663 x 95)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
95 |
by_platform
by_series |
| 17 |
Analysis of severe feather pecking behavior in a high feather pecking selection line (GSE10380) |
[Oligo Array] ARK-Genomics G. gallus 20K v1.0 (GPL5480) |
Aarhus University, Faculty of Agricultural Sciences |
2008-02-05 |
Gallus gallus
 |
3,969,504
(22,176 x 179)
|
179 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
by_platform
by_series |
| 18 |
An initial map of chromosomal segmental copy number variations in chickens (GSE19469) |
[Tiling Array] NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH (GPL9799) |
Tennessee State University |
2009-12-14 |
Gallus gallus
|
3,850,020
(385,002 x 10)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
10 |
by_platform
by_series |
| 19 |
Comparative Transcriptional Profiling of the Axolotl Limb Identifies a Tripartite Regeneration-Specific Gene Program (GSE36451) |
[Oligo Array] Agilent-019788 Ambystoma mexicanum 44k_v3_20080327 [ProbeName version] (GPL15342) |
DFG-Center for Regenerative Therapies Dresden |
2012-03-12 |
Ambystoma mexicanum
 |
3,503,760
(43,797 x 80)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
80 |
by_platform
by_series |
| 20 |
Zebrafish Paired End DiTag libraries (GSE6694) |
[Other] Zebrafish Paired End DiTags (GPL4737) |
Genome Institute Of Singapore |
2007-01-09 |
Danio rerio
|
3,318,370
(663,674 x 5)
|
1 |
|
|
1 |
|
1 |
|
|
|
|
1 |
|
|
|
|
|
|
|
1 |
by_platform
by_series |