Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(811)		   Primates
(10)		   Rodents
(565)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(184)		   Plants
(227)		   Bacteria
(112)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(2,003)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(4)		   Tiling Array
(1)		   cDNA Array
(3)		   Oligo Array
(33)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(6)		   Other
(0)		   All
(48)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression data from zebrafish depleted of Esco2 (GSE27569) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Otago 2011-02-28 Danio rerio
Danio rerio		 234,255
(15,617 x 15) 		15 by_platform
by_series
2 prdm1a mutant vs. wild type (GSE28199) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Colorado Denver 2011-03-28 Danio rerio
Danio rerio		 93,702
(15,617 x 6) 		6 by_platform
by_series
3 Identification of genes associated with lens regeneration from the cornea in Xenopus laevis tadpoles (GSE28014) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) University of Otago 2011-03-17 Xenopus laevis
Xenopus laevis		 140,499
(15,611 x 9) 		9 by_platform
by_series
4 Expression profile of Chicken Early Yolksac Endodermal Tissues (GSE27958) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Center for Developmental Biology, RIKEN 2011-03-14 Gallus gallus
Gallus gallus		 308,280
(38,535 x 8) 		8 by_platform
by_series
5 Zebrafish: Estrogen induced gene expression (GSE27707) [Oligo Array] Zf_16.5K_oligo_COMP_v3Apx (GPL2715) Genome Institute of Singapore 2011-03-07 Danio rerio
Danio rerio		 165,120
(16,512 x 10) 		10 by_platform
by_series
6 Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm (GSE26609) [Oligo Array] Zebrafish 12kb promoter 244K array_slide 2 of 2 (GPL6601) University of Utah 2011-01-13 Danio rerio
Danio rerio		 3,183,174
(176,843 x 18) 		16 2 by_platform
by_series
7 Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm (GSE26609) [Oligo Array] Zebrafish 12kb promoter 244K array_slide 1 of 2 (GPL6600) University of Utah 2011-01-13 Danio rerio
Danio rerio		 3,163,428
(175,746 x 18) 		16 2 by_platform
by_series
8 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus tropicalis Custom Microarray (GPL13126) Technion - Israel Institute of Technology 2011-02-10 Xenopus (Silurana) tropicalis
Xenopus tropicalis		 2,102,544
(43,803 x 48) 		48 by_platform
by_series
9 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus laevis Custom Microarray (GPL13127) Technion - Israel Institute of Technology 2011-02-10 Xenopus laevis
Xenopus laevis		 2,102,544
(43,803 x 48) 		48 by_platform
by_series
10 Neurotoxicogenomic investigations to assess mechanisms of action of the munitions constituents RDX and 2,6-DNT in Northern bobwhite (Colinus virginianus) (GSE27653) [cDNA Array] US Army Northern bobwhite (Colinus virginianus) custom brain tissue cDNA microarray (GPL14917) US Army ERDC 2011-03-02 Colinus virginianus
Colinus virginianus		 1,013,760
(9,216 x 110) 		110 by_platform
by_series
11 Genome expression profile of early response to photobacteriosis in gilthead sea bream (Sparus aurata) (GSE26651) [Oligo Array] University of Padova_Sparus aurata_4x44K_v2.0 (GPL11489) University of Padova 2011-01-15 Sparus aurata
Sparus aurata		 705,088
(44,068 x 16) 		16 by_platform
by_series
12 Effects of the total replacement of fish meal and fish oil with plant protein and oil sources on the hepatic transcriptome of two European sea bass (Dicentrarchus labrax) sub-families exhibiting different growth potentials on an all plant-based diet (GSE27649) [Oligo Array] University of Padova_Dicentrarchus labrax_4x44K array_v1.0 (GPL9663) Ifremer 2011-03-02 Dicentrarchus labrax
Dicentrarchus labrax		 947,688
(39,487 x 24) 		24 by_platform
by_series
13 Differential cardiac gene expression in genetically selected turkeys (GSE27147) [Oligo Array] Turkey skeletal muscle long oligonucleotide (TSKMLO) microarray (GPL9788) University of Minnesota 2011-02-08 Meleagris gallopavo
Meleagris gallopavo		 49,152
(12,288 x 4) 		4 by_platform
by_series
14 Identification and differential expression of microRNAs during metamorphosis in the Japanese flounder (Paralichthys olivaceus) (GSE27986) [Oligo Array] SHOU miRNA Fishes 1K (GPL13286) Shanghai Ocean University 2011-03-16 Paralichthys olivaceus
Paralichthys olivaceus		 1,974
(987 x 2) 		2 by_platform
by_series
15 Analysis of Gene Expression in the Chicken Otocyst (GSE27176) [SAGE NlaIII] SAGE:17:NlaIII:Gallus gallus (GPL1477) Stanford University 2011-02-09 Gallus gallus
Gallus gallus		 48,341
(48,341 x 1) 		1 by_platform
by_series
16 Expression Analysis of Trimethyltin Chlorides (TMT) Impact on Embryonic Development (GSE28131) [Oligo Array] NimbleGen Danio rerio 12x135K Arrays [090818_Zv7_EXPR] (GPL13318) Oregon State University 2011-03-23 Danio rerio
Danio rerio		 461,880
(38,490 x 12) 		12 by_platform
by_series
17 Zebrafish hdac1 mutant and morphant embryos (GSE26710) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio		 910,770
(43,370 x 21) 		13 8 by_platform
by_series
18 Zebrafish embryos: hdac1 Morphants vs Standard control morphants at 12, 18 and 27 hpf (GSE26709) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio		 390,330
(43,370 x 9) 		9 by_platform
by_series
19 Zebrafish 27hpf embryos: hdac1 mutant (hi1618) vs sibling (GSE26707) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio		 346,960
(43,370 x 8) 		8 by_platform
by_series
20 Zebrafish embryos: hdac1 Morphants vs Standard control morphants (GSE26708) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio		 260,220
(43,370 x 6) 		6 by_platform
by_series
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