Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(7)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(1)		   GeneChip
(234)		   Tiling Array
(14)		   cDNA Array
(246)		   Oligo Array
(491)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(117)		   Other
(1)		   All
(1,115)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Seasonal Changes in Patterns of Gene Expression in Avian Song Control Brain Regions (GSE28347) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2011-04-03 Zonotrichia leucophrys gambelii,Taeniopygia guttata
Zonotrichia leucophrys gambelii,Taeniopygia guttata		 1,431,360
(20,160 x 71) 		71 by_platform
by_series
2 The impact of experience-dependent and independent factors on gene expression in songbird brain [e01] (GSE36705) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2012-03-22 Zonotrichia leucophrys gambelii,Taeniopygia guttata
Zonotrichia leucophrys gambelii,Taeniopygia guttata		 1,431,360
(20,160 x 71) 		71 by_platform
by_series
3 Zoarces viviparus evaluation data (GSE14957) [Oligo Array] Zoarces viviparus validation microarray (GPL8222) University of Gothenburg 2009-02-23 Zoarces viviparus
Zoarces viviparus		 124,992
(124,992 x 1) 		1 by_platform
by_series
4 Expression data from hybrid Xenopus sex reversal experiment (GSE9507) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) NIH 2007-11-02 Xenopus laevis x Xenopus muelleri
Xenopus laevis x Xenopus muelleri		 218,554
(15,611 x 14) 		14 by_platform
by_series
5 Expression data from hybrid female Xenopus sex reversal experiment (GSE9504) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) NIH 2007-11-02 Xenopus laevis x Xenopus muelleri
Xenopus laevis x Xenopus muelleri		 124,888
(15,611 x 8) 		8 by_platform
by_series
6 Expression data from hybrid male Xenopus sex reversal experiment (GSE9505) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) NIH 2007-11-02 Xenopus laevis x Xenopus muelleri
Xenopus laevis x Xenopus muelleri		 93,666
(15,611 x 6) 		6 by_platform
by_series
7 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus laevis Custom Microarray (GPL13127) Technion - Israel Institute of Technology 2011-02-10 Xenopus laevis
Xenopus laevis		 2,102,544
(43,803 x 48) 		48 by_platform
by_series
8 [E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages (GSE28390) [GeneChip] [X_laevis_2] Affymetrix Xenopus laevis Genome 2.0 Array (GPL10756) RIKEN Center for Developmental Biology 2011-04-05 Xenopus laevis
Xenopus laevis		 979,050
(32,635 x 30) 		30 by_platform
by_series
9 Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis (GSE28391) [GeneChip] [X_laevis_2] Affymetrix Xenopus laevis Genome 2.0 Array (GPL10756) RIKEN Center for Developmental Biology 2011-04-05 Xenopus laevis
Xenopus laevis		 979,050
(32,635 x 30) 		30 by_platform
by_series
10 Expression data from Xenopus anterior gut RFX6 knockdown (GSE23642) [GeneChip] [X_laevis_2] Affymetrix Xenopus laevis Genome 2.0 Array (GPL10756) Clinical Research Institute of Montreal 2010-08-16 Xenopus laevis
Xenopus laevis		 587,430
(32,635 x 18) 		18 by_platform
by_series
11 Thyroid Hormone (TH) Controls The Remodeling Of The Pancreas And The Liver, Part A (GSE16074) [Oligo Array] Carnegie Xenopus Laevis 44K Microarray (60-mer Oligo) (GPL8463) Carnegie Institution 2009-05-12 Xenopus laevis
Xenopus laevis		 531,296
(33,206 x 16) 		16 by_platform
by_series
12 Thyroid Hormone (TH) Controls The Remodeling Of The Pancreas And The Liver (GSE16075) [Oligo Array] Carnegie Xenopus Laevis 44K Microarray (60-mer Oligo) (GPL8463) Carnegie Institution 2009-05-12 Xenopus laevis
Xenopus laevis		 531,296
(33,206 x 16) 		16 by_platform
by_series
13 Global analysis of the transcriptional network controlling Xenopus endoderm formation (GSE4448) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) Cincinnati Children's Hospital Medical Center 2006-03-10 Xenopus laevis
Xenopus laevis		 483,941
(15,611 x 31) 		31 by_platform
by_series
14 Microarray data Ptf1a gain-of-function Xenopus pancreas development (GSE34193) [GeneChip] [X_laevis_2] Affymetrix Xenopus laevis Genome 2.0 Array (GPL10756) Marine Biology Laboratory 2011-12-06 Xenopus laevis
Xenopus laevis		 456,890
(32,635 x 14) 		14 by_platform
by_series
15 Responsiveness of a premetamorphic Xenopus tadpole brain to hydroxylated PCBs (GSE23154) [Oligo Array] Xenopus Gene Expression Microarray (AMADID: 015066) (GPL10726) Shizuoka University 2010-07-26 Xenopus laevis
Xenopus laevis		 365,415
(21,495 x 17) 		17 by_platform
by_series
16 Transcriptional profiling of somatic cells differentiation throughout oocyte competence acquisition in the xenopus ovarian follicles. (GSE36603) [Oligo Array] Agilent-015066 Xenopus Gene Expression Microarray (Probe Name version) (GPL11258) Institut National de la Recherche Agronomique 2012-03-19 Xenopus laevis
Xenopus laevis		 322,425
(21,495 x 15) 		15 by_platform
by_series
17 Contribution of molecular actors from somatic origin to oocyte developmental competence acquisition, lessons from evolution (GSE36617) [Oligo Array] Agilent-015066 Xenopus Gene Expression Microarray (Probe Name version) (GPL11258) Institut National de la Recherche Agronomique 2012-03-19 Xenopus laevis
Xenopus laevis		 322,425
(21,495 x 15) 		15 by_platform
by_series
18 Identification of putative targets of Nkx2-5 in Xenopus laevis using gene expression analysis and cross-species. (GSE29816) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) IU School of Medicine 2011-06-08 Xenopus laevis
Xenopus laevis		 312,220
(15,611 x 20) 		4 16 by_platform
by_series
19 Genomic Analysis of the Xenopus Organizer (GSE3368) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) Stanford 2005-09-26 Xenopus laevis
Xenopus laevis		 312,220
(15,611 x 20) 		20 by_platform
by_series
20 Examining the immediate early targets of Gata4 and Gata5. (GSE8496) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) Cardiff University 2007-07-16 Xenopus laevis
Xenopus laevis		 312,220
(15,611 x 20) 		20 by_platform
by_series
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