Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(806)		   Primates
(10)		   Rodents
(554)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(182)		   Plants
(225)		   Bacteria
(109)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(1,980)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(4)		   Tiling Array
(1)		   cDNA Array
(3)		   Oligo Array
(33)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(6)		   Other
(0)		   All
(48)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus laevis Custom Microarray (GPL13127) Technion - Israel Institute of Technology 2011-02-10 Xenopus laevis
Xenopus laevis		 2,102,544
(43,803 x 48) 		48 by_platform
by_series
2 Identification of genes associated with lens regeneration from the cornea in Xenopus laevis tadpoles (GSE28014) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) University of Otago 2011-03-17 Xenopus laevis
Xenopus laevis		 140,499
(15,611 x 9) 		9 by_platform
by_series
3 Transcriptional targets of Xenopus EBF3 in the absence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps (GSE27084) [Oligo Array] Agilent Xenopus laevis 22k AMADID-013665 (GPL10302) University of Utah 2011-02-04 Xenopus laevis
Xenopus laevis		 42,990
(21,495 x 2) 		2 by_platform
by_series
4 Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility (GSE27227) [Oligo Array] Xenopus tropicalis Custom Microarray (GPL13126) Technion - Israel Institute of Technology 2011-02-10 Xenopus (Silurana) tropicalis
Xenopus tropicalis		 2,102,544
(43,803 x 48) 		48 by_platform
by_series
5 Genome expression profile of early response to photobacteriosis in gilthead sea bream (Sparus aurata) (GSE26651) [Oligo Array] University of Padova_Sparus aurata_4x44K_v2.0 (GPL11489) University of Padova 2011-01-15 Sparus aurata
Sparus aurata		 705,088
(44,068 x 16) 		16 by_platform
by_series
6 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in skin of Atlantic salmon (GSE26981) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) Akvaforsk 2011-01-31 Salmo salar
Salmo salar		 904,400
(45,220 x 20) 		20 by_platform
by_series
7 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in spleen of Atlantic salmon (GSE26984) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ4 (GPL10706) Akvaforsk 2011-01-31 Salmo salar
Salmo salar		 904,400
(45,220 x 20) 		20 by_platform
by_series
8 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in Atlantic salmon (GSE27013) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) Akvaforsk 2011-02-02 Salmo salar
Salmo salar		 904,400
(45,220 x 20) 		20 by_platform
by_series
9 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in Atlantic salmon (GSE27013) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ4 (GPL10706) Akvaforsk 2011-02-02 Salmo salar
Salmo salar		 904,400
(45,220 x 20) 		20 by_platform
by_series
10 Comparison of genomic, morphological, and behavioral responses among fathead minnow (Pimephales promelas ) and zebrafish (Danio rerio) to acute RDX exposure (GSE27067) [Oligo Array] Agilent-019597 custom fathead minnow 60mer (8x15k) (GPL10259) US Army Engineer Research and Development Center 2011-02-04 Pimephales promelas
Pimephales promelas		 534,380
(15,268 x 35) 		35 by_platform
by_series
11 Effects of a short-term exposure to the fungicide prochloraz on endocrine function and gene expression in female fathead minnows (Pimephales promelas) (GSE26958) [Oligo Array] Agilent-019597 FHM_Denslow_8x15K (GPL9248) Mississippi State University 2011-01-30 Pimephales promelas
Pimephales promelas		 362,112
(15,744 x 23) 		23 by_platform
by_series
12 Identification and differential expression of microRNAs during metamorphosis in the Japanese flounder (Paralichthys olivaceus) (GSE27986) [Oligo Array] SHOU miRNA Fishes 1K (GPL13286) Shanghai Ocean University 2011-03-16 Paralichthys olivaceus
Paralichthys olivaceus		 1,974
(987 x 2) 		2 by_platform
by_series
13 Differentiating size-dependent responses of juvenile pink salmon (Oncorhynchus gorbuscha) to sea lice (Lepeophtheirus salmonis) infections (GSE27528) [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 2, 02/08 (GPL13225) The University of Victoria 2011-02-25 Oncorhynchus gorbuscha
Oncorhynchus gorbuscha		 1,213,056
(33,696 x 36) 		36 by_platform
by_series
14 Sexually dimorphic transcriptomic responses in the largemouth bass to the neuroactive pesticide dieldrin (GSE27963) [Oligo Array] LMB microarray 15K (Agilent format) (GPL13229) University of New Brunswick 2011-03-15 Micropterus salmoides
Micropterus salmoides		 304,160
(15,208 x 20) 		20 by_platform
by_series
15 Diet study with EE2 in liver of female largemouth bass (LMB) (GSE28143) [Oligo Array] LMB microarray 15K (Agilent format) (GPL13229) University of Florida 2011-03-23 Micropterus salmoides
Micropterus salmoides		 197,704
(15,208 x 13) 		13 by_platform
by_series
16 Differential cardiac gene expression in genetically selected turkeys (GSE27147) [Oligo Array] Turkey skeletal muscle long oligonucleotide (TSKMLO) microarray (GPL9788) University of Minnesota 2011-02-08 Meleagris gallopavo
Meleagris gallopavo		 49,152
(12,288 x 4) 		4 by_platform
by_series
17 Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq (GSE27994) [HT Sequencing] Illumina Genome Analyzer II (Labeo rohita) (GPL13291) Nofima Marin 2011-03-16 Labeo rohita
Labeo rohita		 2
(0 x 2) 		2 by_platform
by_series
18 Gene expression in three different chicken lines after Salmonella infection early in life (GSE27069) [Oligo Array] ARK-Genomics G. gallus 20K v1.0 (GPL5480) Wageningen UR 2011-02-04 Gallus gallus
Gallus gallus		 842,688
(22,176 x 38) 		38 by_platform
by_series
19 Transcriptional Profiling of the Anterior Pituitary Gland of Genetically Selected Fat and Lean Chickens (GSE26584) [cDNA Array] DEL-MAR 14K Integrated Systems (GPL1731) University of Maryland 2011-01-12 Gallus gallus
Gallus gallus		 614,400
(19,200 x 32) 		32 by_platform
by_series
20 Expression profile of Chicken Early Yolksac Endodermal Tissues (GSE27958) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Center for Developmental Biology, RIKEN 2011-03-14 Gallus gallus
Gallus gallus		 308,280
(38,535 x 8) 		8 by_platform
by_series
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