Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page

An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Human (17,885)   Primates (199)   Rodents (12,016)   Mammals (754)   Vertebrates (1,115)   Invertebrates (3,796)   Plants (6,479)   Bacteria (2,920)   Viruses (51)   Phages (4)   Unclassified (249)   All (45,516)

SAGE NlaIII (0)   SAGE RsaI (0)   SAGE Sau3A (0)   MPSS (1)   GeneChip (0)   Tiling Array (0)   cDNA Array (0)   Oligo Array (491)   Bead Array (0)   Protein Array (0)   Antibody (0)   RT-PCR (0)   HT-Seq (0)   Other (1)   All (1,115)   1   |   2   |   3   |   4   |   5      »      [56] Title Platform Institute Submission date Species Data size (probes x samples) Sample NCBI FTP site Animal Plant   brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified 1 Transcriptome profiling analysis of bacterial challenged Lateolabrax japonicus reveals deep insight into the immune-relevant genes in marine fish (DGE) (GSE21712) [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) ZheJiang University 2010-05-06 Lateolabrax japonicus 2 (0 x 2) 2 by_platform by_series 2 Transcriptome profiling analysis of bacterial challenged Lateolabrax japonicus reveals deep insight into the immune-relevant genes in marine fish (RNA-seq) (GSE21721) [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) ZheJiang University 2010-05-06 Lateolabrax japonicus 1 (0 x 1) 1 by_platform by_series 3 Expression data of spleens from chickens infected with different Newcastle Disease Viruses (GSE40100) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Yangzhou University 2012-08-14 Gallus gallus 346,815 (38,535 x 9) 9 by_platform by_series 4 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina (GSE10538) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Yale University 2008-02-15 Gallus gallus 924,840 (38,535 x 24) 24 by_platform by_series 5 Crosstalk between Fgf and Wnt signaling in the zebrafish tailbud (GSE38969) [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) Yale University 2012-06-27 Danio rerio 654,945 (43,663 x 15) 15 by_platform by_series 6 Develomental Time Course of the Retinal Pigment Epithelial Transcriptome (GSE7176) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Yale University 2007-03-02 Gallus gallus 539,490 (38,535 x 14) 14 by_platform by_series 7 Transcriptomic Analysis of the Effects of Cyclopamine Exposure on Xenopus Limb Development (GSE8293) [GeneChip] [Xenopus_laevis] Affymetrix Xenopus laevis Genome Array (GPL1318) Yale University 2007-06-26 Xenopus laevis 124,888 (15,611 x 8) 8 by_platform by_series 8 Microarray Analysis of microRNA Expression during Axolotl Limb Regeneration (GSE29727) [Oligo Array] miRCURY LNA microRNA Array, v. 9.2, all organisms (GPL7724) Yale University 2011-06-03 Ambystoma mexicanum 13,470 (2,245 x 6) 6 by_platform by_series 9 Microarray Analysis of microRNA Expression during Axolotl Limb Regeneration (GSE29727) [Oligo Array] LC_MRA-1001C_miRHuman_12.0_080930 (miRNA ID version) (GPL13686) Yale University 2011-06-03 Ambystoma mexicanum 671 (671 x 1) 1 by_platform by_series 10 Ribosome profiling of early zebrafish embryos -- miRNA-mediated regulation during embryogenesis causes translational repression before mRNA decay (GSE34743) [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) Yale University 2011-12-27 Danio rerio 22 (0 x 22) 22 by_platform by_series 11 mRNA-seq data of embryonic chicken digits (GSE28156) [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) Yale University 2011-03-24 Gallus gallus 16 (0 x 16) 16 by_platform by_series 12 A novel miRNA processing pathway independent of Dicer requires Argonaute2 catalytic activity (GSE21503) [HT Sequencing] Illumina Genome Analyzer (Danio rerio) (GPL10164) Yale University 2010-04-23 Danio rerio 5 (0 x 5) 5 by_platform by_series 13 Identification and developmental expression of the full complement of cytochrome P450 genes in zebrafish (GSE24840) [Oligo Array] WHOI Zebrafish 44k v1.0 custom-commercial Chemical Defensome (GPL11077) Woods Hole Oceanographic Institution 2010-10-20 Danio rerio 525,432 (21,893 x 24) 24 by_platform by_series 14 MicroRNA expression profiling after short-term exposure to TCDD in zebrafish embryos [agilent and exiqon array data] (GSE38839) [Oligo Array] 8x15K custom made zebrafish miRNA microarray [Agilent-024479] (GPL15720) Woods Hole Oceanographic Institution 2012-06-20 Danio rerio 64,020 (5,335 x 12) 12 by_platform by_series 15 MicroRNA expression profiling after short-term exposure to TCDD in zebrafish embryos (GSE39809) [Oligo Array] 8x15K custom made zebrafish miRNA microarray [Agilent-024479] (GPL15720) Woods Hole Oceanographic Institution 2012-08-01 Danio rerio 64,020 (5,335 x 12) 12 by_platform by_series 16 MicroRNA expression profiling after short-term exposure to TCDD in zebrafish embryos [agilent and exiqon array data] (GSE38839) [Oligo Array] miRCURY LNA microRNA Array, v. 9.2, all organisms (GPL7724) Woods Hole Oceanographic Institution 2012-06-20 Danio rerio 26,940 (2,245 x 12) 12 by_platform by_series 17 MicroRNA expression profiling after short-term exposure to TCDD in zebrafish embryos (GSE39809) [Oligo Array] miRCURY LNA microRNA Array, v. 9.2, all organisms (GPL7724) Woods Hole Oceanographic Institution 2012-08-01 Danio rerio 26,940 (2,245 x 12) 12 by_platform by_series 18 Hepatic transcriptome response to glucocorticoid receptor activation in rainbow trout. (GSE7671) [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) Woods Hole Oceanographic Institution 2007-04-30 Oncorhynchus mykiss 6,528 (384 x 17) 17 by_platform by_series 19 Brain transcriptomics in response to beta-naphthoflavone treatment in rainbow trout: The role of AhR signaling. (GSE6745) [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) Woods Hole Oceanographic Institution 2007-01-14 Oncorhynchus mykiss 6,144 (384 x 16) 16 by_platform by_series 20 Tissue Contaminants and Associated Transcriptional Response in Trout Liver from High Elevation Lakes of Washington (GSE6886) [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) Woods Hole Oceanographic Institution 2007-01-27 Oncorhynchus clarkii,Oncorhynchus mykiss 3,072 (384 x 8) 8 by_platform by_series 1   |   2   |   3   |   4   |   5      »      [56]