Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(4)
  Tiling Array
(1)
  cDNA Array
(3)
  Oligo Array
(34)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(6)
  Other
(0)
  All
(49)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Zebrafish: Estrogen induced gene expression (GSE27707) [Oligo Array] Zf_16.5K_oligo_COMP_v3Apx (GPL2715) Genome Institute of Singapore 2011-03-07 Danio rerio
Danio rerio
165,120
(16,512 x 10)
10 by_platform
by_series
2 Zebrafish hdac1 mutant and morphant embryos (GSE26710) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
910,770
(43,370 x 21)
13 8 by_platform
by_series
3 Zebrafish embryos: hdac1 Morphants vs Standard control morphants at 12, 18 and 27 hpf (GSE26709) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
390,330
(43,370 x 9)
9 by_platform
by_series
4 Zebrafish embryos: hdac1 Morphants vs Standard control morphants (GSE26708) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
260,220
(43,370 x 6)
6 by_platform
by_series
5 Zebrafish 27hpf embryos: hdac1 mutant (hi1618) vs sibling (GSE26707) [Oligo Array] LU/IBL_D.rerio_44k_015747 (GPL7735) University of Sheffield 2011-01-19 Danio rerio
Danio rerio
346,960
(43,370 x 8)
8 by_platform
by_series
6 Transcriptomic profiles of Japanese medaka (Oryzias latipes) in response to alkalinity stress (GSE27298) [Oligo Array] Agilent-023673 ECSFRI medaka 4x44K (GPL13167) East China Sea Fisheries Research Institute 2011-02-14 Oryzias latipes
Oryzias latipes
158,934
(26,489 x 6)
6 by_platform
by_series
7 Transcriptome-wide analysis of small RNA expression in early zebrafish development (GSE27722) [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) Vanderbilt University 2011-03-07 Danio rerio
Danio rerio
5
(0 x 5)
5 by_platform
by_series
8 Transcriptional targets of Xenopus EBF3 in the absence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps (GSE27084) [Oligo Array] Agilent Xenopus laevis 22k AMADID-013665 (GPL10302) University of Utah 2011-02-04 Xenopus laevis
Xenopus laevis
42,990
(21,495 x 2)
2 by_platform
by_series
9 Transcriptional Response of Zebrafish Embryos Exposed to Neurotoxic Compounds Reveals a Muscle Activity Dependent hspb11 Expression (GSE27680) [Oligo Array] Agilent-015064 D. rerio (Zebrafish) Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6563) UFZ Helmholtz Centre for Environmental Research 2011-03-04 Danio rerio
Danio rerio
1,447,040
(45,220 x 32)
32 by_platform
by_series
10 Transcriptional Profiling of the Anterior Pituitary Gland of Genetically Selected Fat and Lean Chickens (GSE26584) [cDNA Array] DEL-MAR 14K Integrated Systems (GPL1731) University of Maryland 2011-01-12 Gallus gallus
Gallus gallus
614,400
(19,200 x 32)
32 by_platform
by_series
11 The impact of chronic temperature elevation on the spleen anti-viral transcriptomic response in Atlantic cod (Gadus morhua) (GSE27299) [Oligo Array] CGP Atlantic cod 20K oligo array v1.0 (GPL10532) Memorial University of Newfoundland 2011-02-14 Gadus morhua
Gadus morhua
1,200,000
(20,000 x 60)
60 by_platform
by_series
12 Solexa sequencing of small RNAs in Singapore grouper iridovirus (SGIV)-infected grouper cells (GSE26909) [HT Sequencing] Illumina Genome Analyzer (Epinephelus tauvina) (GPL11666) Sun Yat-sen university 2011-01-27 Epinephelus tauvina
Epinephelus tauvina
1
(0 x 1)
1 by_platform
by_series
13 Sexually dimorphic transcriptomic responses in the largemouth bass to the neuroactive pesticide dieldrin (GSE27963) [Oligo Array] LMB microarray 15K (Agilent format) (GPL13229) UF 2011-03-15 Micropterus salmoides
Micropterus salmoides
304,160
(15,208 x 20)
20 by_platform
by_series
14 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in spleen of Atlantic salmon (GSE26984) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ4 (GPL10706) Nofima AS 2011-01-31 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
15 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in skin of Atlantic salmon (GSE26981) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) Nofima AS 2011-01-31 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
16 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in Atlantic salmon (GSE27013) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ3 (GPL10705) Nofima AS 2011-02-02 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
17 Responses to ectoparasite salmon louse (Lepeophtheirus salmonis) in Atlantic salmon (GSE27013) [Oligo Array] Agilent Salmon Immunity and Quality 44k custom array_SIQ4 (GPL10706) Nofima AS 2011-02-02 Salmo salar
Salmo salar
904,400
(45,220 x 20)
20 by_platform
by_series
18 prdm1a mutant vs. wild type (GSE28199) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Colorado Denver 2011-03-28 Danio rerio
Danio rerio
93,702
(15,617 x 6)
6 by_platform
by_series
19 Nuclear Factor Kappa B is central to Marek’s Disease lymphomagenesis (GSE28034) [Oligo Array] Chicken 44K custom Agilent microarray (GPL4993) Texas A&M University 2011-03-18 Gallus gallus
Gallus gallus
168,136
(42,034 x 4)
4 by_platform
by_series
20 Neurotoxicogenomic investigations to assess mechanisms of action of the munitions constituents RDX and 2,6-DNT in Northern bobwhite (Colinus virginianus) (GSE27653) [cDNA Array] US Army Northern bobwhite (Colinus virginianus) custom brain tissue cDNA microarray (GPL14917) US Army ERDC 2011-03-02 Colinus virginianus
Colinus virginianus
1,013,760
(9,216 x 110)
110 by_platform
by_series
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