Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(13)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(3,128)
  Tiling Array
(76)
  cDNA Array
(6,517)
  Oligo Array
(11,209)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(46)
  HT-Seq
(1,567)
  Other
(5)
  All
(22,581)
 
  brain
(2,471)
  blood
(999)
  connective
(805)
  reproductive
(1,737)
  muscular
(1,362)
  digestive
(580)
  liver
(2,924)
  lung
(899)
  urinary
(514)
  endo/exo-crine
(189)
  embryo
(2,850)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1,225)
  unclassified
(6,026)
  all
(22,581)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM979713 duodenum HRFI day 42 rep4 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 42 rep4
2 GSM979712 duodenum HRFI day 42 rep3 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 42 rep3
3 GSM979711 duodenum HRFI day 42 rep2 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 42 rep2
4 GSM979710 duodenum HRFI day 42 rep1 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 42 rep1
5 GSM979709 duodenum HRFI day 35 rep4 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 35 rep4
6 GSM979708 duodenum HRFI day 35 rep3 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 35 rep3
7 GSM979707 duodenum HRFI day 35 rep2 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 35 rep2
8 GSM979706 duodenum HRFI day 35 rep1 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum HRFI day 35 rep1
9 GSM979705 duodenum LRFI day 42 rep4 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 42 rep4
10 GSM979704 duodenum LRFI day 42 rep3 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 42 rep3
11 GSM979703 duodenum LRFI day 42 rep2 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 42 rep2
12 GSM979702 duodenum LRFI day 42 rep1 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 42 rep1
13 GSM979701 duodenum LRFI day 35 rep4 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 35 rep4
14 GSM979700 duodenum LRFI day 35 rep3 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 35 rep3
15 GSM979699 duodenum LRFI day 35 rep2 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 35 rep2
16 GSM979698 duodenum LRFI day 35 rep1 38,535 University of Georgia 2012-08-01 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
intestine duodenum LRFI day 35 rep1
17 GSM920290 Ssalar_7daypostSBMfeed_rep10_tank1 43,689 The University of Victoria 2012-04-20 [Oligo Array] Agilent-025055 Koop Lab Salmonid 44k (GPL11299) RNA Salmo salar
Salmo salar
intestine Distal intestine Pooled 3 indiv intestine samples from each condition (n=18)
18 GSM920289 Ssalar_7daypostSBMfeed_rep9_tank1 43,689 The University of Victoria 2012-04-20 [Oligo Array] Agilent-025055 Koop Lab Salmonid 44k (GPL11299) RNA Salmo salar
Salmo salar
intestine Distal intestine Pooled 3 indiv intestine samples from each condition (n=18)
19 GSM920288 Ssalar_7daypostSBMfeed_rep8_tank1 43,689 The University of Victoria 2012-04-20 [Oligo Array] Agilent-025055 Koop Lab Salmonid 44k (GPL11299) RNA Salmo salar
Salmo salar
intestine Distal intestine Pooled 3 indiv intestine samples from each condition (n=18)
20 GSM920287 Ssalar_7daypostSBMfeed_rep7_tank1 43,689 The University of Victoria 2012-04-20 [Oligo Array] Agilent-025055 Koop Lab Salmonid 44k (GPL11299) RNA Salmo salar
Salmo salar
intestine Distal intestine Pooled 3 indiv intestine samples from each condition (n=18)
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